rs9433784

Homo sapiens
G>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0158 (4744/29980,GnomAD)
T=0166 (4840/29118,TOPMED)
T=0171 (855/5008,1000G)
T=0130 (501/3854,ALSPAC)
T=0132 (491/3708,TWINSUK)
chr1:101318784 (GRCh38.p7) (1p21.2)
AD
GWASdb2
1   publication(s)
See rs on genome
14 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 1NC_000001.11:g.101318784G>T
GRCh37.p13 chr 1NC_000001.10:g.101784340G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.721T=0.279
1000GenomesAmericanSub694G=0.890T=0.110
1000GenomesEast AsianSub1008G=0.903T=0.097
1000GenomesEuropeSub1006G=0.885T=0.115
1000GenomesGlobalStudy-wide5008G=0.829T=0.171
1000GenomesSouth AsianSub978G=0.800T=0.200
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.870T=0.130
The Genome Aggregation DatabaseAfricanSub8722G=0.773T=0.227
The Genome Aggregation DatabaseAmericanSub838G=0.900T=0.100
The Genome Aggregation DatabaseEast AsianSub1622G=0.915T=0.085
The Genome Aggregation DatabaseEuropeSub18496G=0.864T=0.135
The Genome Aggregation DatabaseGlobalStudy-wide29980G=0.841T=0.158
The Genome Aggregation DatabaseOtherSub302G=0.890T=0.110
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.833T=0.166
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.868T=0.132
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs94337840.000719alcohol dependence21314694

eQTL of rs9433784 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9433784 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr1101756040101756631E068-27709
chr1101756673101756777E068-27563
chr1101749060101749302E070-35038
chr1101781019101781109E070-3231
chr1101781194101781435E070-2905
chr1101782521101782561E070-1779
chr1101805405101805462E07021065
chr1101832232101832312E07047892
chr1101832539101832611E07048199
chr1101834066101834116E07049726
chr1101753708101754529E071-29811
chr1101757056101757555E071-26785
chr1101757581101757703E071-26637
chr1101753708101754529E072-29811