| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 13 | NC_000013.11:g.27012736G>A |
| GRCh38.p7 chr 13 | NC_000013.11:g.27012736G>C |
| GRCh37.p13 chr 13 | NC_000013.10:g.27586873G>A |
| GRCh37.p13 chr 13 | NC_000013.10:g.27586873G>C |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.902 | C=0.098 |
| 1000Genomes | American | Sub | 694 | G=0.940 | C=0.060 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.977 | C=0.023 |
| 1000Genomes | Europe | Sub | 1006 | G=0.897 | C=0.103 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.929 | C=0.071 |
| 1000Genomes | South Asian | Sub | 978 | G=0.940 | C=0.060 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.833 | C=0.167 |
| The Genome Aggregation Database | African | Sub | 8710 | G=0.903 | A=0.000 |
| The Genome Aggregation Database | American | Sub | 836 | G=0.940 | A=0.00, |
| The Genome Aggregation Database | East Asian | Sub | 1618 | G=0.970 | A=0.000 |
| The Genome Aggregation Database | Europe | Sub | 18470 | G=0.874 | A=0.000 |
| The Genome Aggregation Database | Global | Study-wide | 29934 | G=0.890 | A=0.000 |
| The Genome Aggregation Database | Other | Sub | 300 | G=0.950 | A=0.00, |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29116 | G=0.890 | C=0.109 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.839 | C=0.161 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs9512491 | 5E-06 | alcohol dependence | 21314694 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr13 | 27163476 | 27163647 | E067 | -22674 |
| chr13 | 27163914 | 27163975 | E067 | -22346 |
| chr13 | 27164016 | 27164171 | E067 | -22150 |
| chr13 | 27164280 | 27164373 | E067 | -21948 |
| chr13 | 27165247 | 27165524 | E067 | -20797 |
| chr13 | 27174041 | 27174281 | E067 | -12040 |
| chr13 | 27174456 | 27174914 | E067 | -11407 |
| chr13 | 27174979 | 27175096 | E067 | -11225 |
| chr13 | 27175862 | 27176230 | E067 | -10091 |
| chr13 | 27178780 | 27179342 | E067 | -6979 |
| chr13 | 27179482 | 27179599 | E067 | -6722 |
| chr13 | 27179632 | 27179686 | E067 | -6635 |
| chr13 | 27179829 | 27179873 | E067 | -6448 |
| chr13 | 27180064 | 27180283 | E067 | -6038 |
| chr13 | 27232564 | 27233021 | E067 | 46243 |
| chr13 | 27233069 | 27233172 | E067 | 46748 |
| chr13 | 27233262 | 27233328 | E067 | 46941 |
| chr13 | 27233395 | 27233542 | E067 | 47074 |
| chr13 | 27233691 | 27233738 | E067 | 47370 |
| chr13 | 27235660 | 27235720 | E067 | 49339 |
| chr13 | 27140635 | 27140787 | E068 | -45534 |
| chr13 | 27158034 | 27158141 | E068 | -28180 |
| chr13 | 27163476 | 27163647 | E068 | -22674 |
| chr13 | 27163914 | 27163975 | E068 | -22346 |
| chr13 | 27164016 | 27164171 | E068 | -22150 |
| chr13 | 27173361 | 27173437 | E068 | -12884 |
| chr13 | 27173532 | 27173618 | E068 | -12703 |
| chr13 | 27173703 | 27174017 | E068 | -12304 |
| chr13 | 27178349 | 27178403 | E068 | -7918 |
| chr13 | 27179482 | 27179599 | E068 | -6722 |
| chr13 | 27179632 | 27179686 | E068 | -6635 |
| chr13 | 27179829 | 27179873 | E068 | -6448 |
| chr13 | 27180064 | 27180283 | E068 | -6038 |
| chr13 | 27234623 | 27234727 | E068 | 48302 |
| chr13 | 27235076 | 27235182 | E068 | 48755 |
| chr13 | 27163476 | 27163647 | E069 | -22674 |
| chr13 | 27163914 | 27163975 | E069 | -22346 |
| chr13 | 27164016 | 27164171 | E069 | -22150 |
| chr13 | 27164280 | 27164373 | E069 | -21948 |
| chr13 | 27165247 | 27165524 | E069 | -20797 |
| chr13 | 27175862 | 27176230 | E069 | -10091 |
| chr13 | 27177973 | 27178023 | E069 | -8298 |
| chr13 | 27178092 | 27178160 | E069 | -8161 |
| chr13 | 27178349 | 27178403 | E069 | -7918 |
| chr13 | 27178780 | 27179342 | E069 | -6979 |
| chr13 | 27179482 | 27179599 | E069 | -6722 |
| chr13 | 27179632 | 27179686 | E069 | -6635 |
| chr13 | 27179829 | 27179873 | E069 | -6448 |
| chr13 | 27180064 | 27180283 | E069 | -6038 |
| chr13 | 27180291 | 27180382 | E069 | -5939 |
| chr13 | 27180859 | 27181041 | E069 | -5280 |
| chr13 | 27231618 | 27231668 | E069 | 45297 |
| chr13 | 27232564 | 27233021 | E069 | 46243 |
| chr13 | 27233069 | 27233172 | E069 | 46748 |
| chr13 | 27233262 | 27233328 | E069 | 46941 |
| chr13 | 27233395 | 27233542 | E069 | 47074 |
| chr13 | 27233691 | 27233738 | E069 | 47370 |
| chr13 | 27235660 | 27235720 | E069 | 49339 |
| chr13 | 27236190 | 27236230 | E069 | 49869 |
| chr13 | 27163914 | 27163975 | E070 | -22346 |
| chr13 | 27164016 | 27164171 | E070 | -22150 |
| chr13 | 27164280 | 27164373 | E070 | -21948 |
| chr13 | 27177973 | 27178023 | E070 | -8298 |
| chr13 | 27178092 | 27178160 | E070 | -8161 |
| chr13 | 27178349 | 27178403 | E070 | -7918 |
| chr13 | 27178780 | 27179342 | E070 | -6979 |
| chr13 | 27179482 | 27179599 | E070 | -6722 |
| chr13 | 27179632 | 27179686 | E070 | -6635 |
| chr13 | 27179829 | 27179873 | E070 | -6448 |
| chr13 | 27180064 | 27180283 | E070 | -6038 |
| chr13 | 27180291 | 27180382 | E070 | -5939 |
| chr13 | 27232564 | 27233021 | E070 | 46243 |
| chr13 | 27233069 | 27233172 | E070 | 46748 |
| chr13 | 27233262 | 27233328 | E070 | 46941 |
| chr13 | 27233395 | 27233542 | E070 | 47074 |
| chr13 | 27136597 | 27136942 | E071 | -49379 |
| chr13 | 27137156 | 27137263 | E071 | -49058 |
| chr13 | 27138010 | 27138121 | E071 | -48200 |
| chr13 | 27163914 | 27163975 | E071 | -22346 |
| chr13 | 27165247 | 27165524 | E071 | -20797 |
| chr13 | 27173703 | 27174017 | E071 | -12304 |
| chr13 | 27174041 | 27174281 | E071 | -12040 |
| chr13 | 27174456 | 27174914 | E071 | -11407 |
| chr13 | 27175862 | 27176230 | E071 | -10091 |
| chr13 | 27179482 | 27179599 | E071 | -6722 |
| chr13 | 27179632 | 27179686 | E071 | -6635 |
| chr13 | 27179829 | 27179873 | E071 | -6448 |
| chr13 | 27180064 | 27180283 | E071 | -6038 |
| chr13 | 27180291 | 27180382 | E071 | -5939 |
| chr13 | 27231618 | 27231668 | E071 | 45297 |
| chr13 | 27232564 | 27233021 | E071 | 46243 |
| chr13 | 27233069 | 27233172 | E071 | 46748 |
| chr13 | 27233262 | 27233328 | E071 | 46941 |
| chr13 | 27233395 | 27233542 | E071 | 47074 |
| chr13 | 27233691 | 27233738 | E071 | 47370 |
| chr13 | 27234375 | 27234419 | E071 | 48054 |
| chr13 | 27234623 | 27234727 | E071 | 48302 |
| chr13 | 27235076 | 27235182 | E071 | 48755 |
| chr13 | 27163476 | 27163647 | E072 | -22674 |
| chr13 | 27178092 | 27178160 | E072 | -8161 |
| chr13 | 27178780 | 27179342 | E072 | -6979 |
| chr13 | 27184462 | 27184512 | E072 | -1809 |
| chr13 | 27184709 | 27185062 | E072 | -1259 |
| chr13 | 27202408 | 27202458 | E072 | 16087 |
| chr13 | 27202545 | 27202637 | E072 | 16224 |
| chr13 | 27232564 | 27233021 | E072 | 46243 |
| chr13 | 27233069 | 27233172 | E072 | 46748 |
| chr13 | 27233262 | 27233328 | E072 | 46941 |
| chr13 | 27233395 | 27233542 | E072 | 47074 |
| chr13 | 27233691 | 27233738 | E072 | 47370 |
| chr13 | 27141546 | 27141586 | E073 | -44735 |
| chr13 | 27141668 | 27141708 | E073 | -44613 |
| chr13 | 27141998 | 27142077 | E073 | -44244 |
| chr13 | 27163476 | 27163647 | E073 | -22674 |
| chr13 | 27165247 | 27165524 | E073 | -20797 |
| chr13 | 27175862 | 27176230 | E073 | -10091 |
| chr13 | 27233691 | 27233738 | E073 | 47370 |
| chr13 | 27234375 | 27234419 | E073 | 48054 |
| chr13 | 27234623 | 27234727 | E073 | 48302 |
| chr13 | 27235076 | 27235182 | E073 | 48755 |
| chr13 | 27136597 | 27136942 | E074 | -49379 |
| chr13 | 27163476 | 27163647 | E074 | -22674 |
| chr13 | 27163914 | 27163975 | E074 | -22346 |
| chr13 | 27165247 | 27165524 | E074 | -20797 |
| chr13 | 27173703 | 27174017 | E074 | -12304 |
| chr13 | 27174041 | 27174281 | E074 | -12040 |
| chr13 | 27175862 | 27176230 | E074 | -10091 |
| chr13 | 27177973 | 27178023 | E074 | -8298 |
| chr13 | 27178092 | 27178160 | E074 | -8161 |
| chr13 | 27178349 | 27178403 | E074 | -7918 |
| chr13 | 27178780 | 27179342 | E074 | -6979 |
| chr13 | 27179482 | 27179599 | E074 | -6722 |
| chr13 | 27179632 | 27179686 | E074 | -6635 |
| chr13 | 27179829 | 27179873 | E074 | -6448 |
| chr13 | 27180064 | 27180283 | E074 | -6038 |
| chr13 | 27180291 | 27180382 | E074 | -5939 |
| chr13 | 27180859 | 27181041 | E074 | -5280 |
| chr13 | 27191611 | 27191744 | E074 | 5290 |
| chr13 | 27231077 | 27231408 | E074 | 44756 |
| chr13 | 27231618 | 27231668 | E074 | 45297 |
| chr13 | 27232564 | 27233021 | E074 | 46243 |
| chr13 | 27233069 | 27233172 | E074 | 46748 |
| chr13 | 27233262 | 27233328 | E074 | 46941 |
| chr13 | 27233395 | 27233542 | E074 | 47074 |
| chr13 | 27233691 | 27233738 | E074 | 47370 |
| chr13 | 27234375 | 27234419 | E074 | 48054 |
| chr13 | 27234623 | 27234727 | E074 | 48302 |
| chr13 | 27188986 | 27189166 | E081 | 2665 |
| chr13 | 27232564 | 27233021 | E081 | 46243 |
| chr13 | 27164016 | 27164171 | E082 | -22150 |
| chr13 | 27164280 | 27164373 | E082 | -21948 |
| chr13 | 27175862 | 27176230 | E082 | -10091 |
| chr13 | 27232564 | 27233021 | E082 | 46243 |
| chr13 | 27233069 | 27233172 | E082 | 46748 |
| chr13 | 27233262 | 27233328 | E082 | 46941 |
| chr13 | 27233395 | 27233542 | E082 | 47074 |
| chr13 | 27233691 | 27233738 | E082 | 47370 |