rs9515034

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0039 (1180/29962,GnomAD)
T=0022 (651/29118,TOPMED)
T=0014 (69/5008,1000G)
T=0046 (179/3854,ALSPAC)
T=0047 (175/3708,TWINSUK)
chr13:109260209 (GRCh38.p7) (13q33.3)
AD
GWASdb2
1   publication(s)
See rs on genome
13 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.109260209C>T
GRCh37.p13 chr 13NC_000013.10:g.109912557C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.998T=0.002
1000GenomesAmericanSub694C=0.990T=0.010
1000GenomesEast AsianSub1008C=0.999T=0.001
1000GenomesEuropeSub1006C=0.947T=0.053
1000GenomesGlobalStudy-wide5008C=0.986T=0.014
1000GenomesSouth AsianSub978C=1.000T=0.000
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.954T=0.046
The Genome Aggregation DatabaseAfricanSub8732C=0.991T=0.009
The Genome Aggregation DatabaseAmericanSub836C=0.980T=0.020
The Genome Aggregation DatabaseEast AsianSub1620C=0.998T=0.002
The Genome Aggregation DatabaseEuropeSub18472C=0.941T=0.058
The Genome Aggregation DatabaseGlobalStudy-wide29962C=0.960T=0.039
The Genome Aggregation DatabaseOtherSub302C=0.990T=0.010
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.977T=0.022
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.953T=0.047
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs95150341.01E-05alcohol consumption23953852

eQTL of rs9515034 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9515034 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr13109895164109896513E067-16044
chr13109863485109863537E068-49020
chr13109863618109863662E068-48895
chr13109895164109896513E069-16044
chr13109895164109896513E070-16044
chr13109896528109896648E070-15909
chr13109896665109897420E070-15137
chr13109895164109896513E072-16044
chr13109927590109928219E08115033
chr13109928260109928591E08115703
chr13109933132109933215E08120575
chr13109896528109896648E082-15909
chr13109896665109897420E082-15137