rs9516375

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0145 (4333/29848,GnomAD)
T=0182 (5318/29114,TOPMED)
T=0145 (726/5008,1000G)
T=0106 (409/3854,ALSPAC)
T=0103 (383/3708,TWINSUK)
chr13:87057753 (GRCh38.p7) (13q31.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.87057753C>T
GRCh37.p13 chr 13NC_000013.10:g.87710008C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.669T=0.331
1000GenomesAmericanSub694C=0.910T=0.090
1000GenomesEast AsianSub1008C=0.969T=0.031
1000GenomesEuropeSub1006C=0.906T=0.094
1000GenomesGlobalStudy-wide5008C=0.855T=0.145
1000GenomesSouth AsianSub978C=0.900T=0.100
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.894T=0.106
The Genome Aggregation DatabaseAfricanSub8698C=0.705T=0.295
The Genome Aggregation DatabaseAmericanSub830C=0.930T=0.070
The Genome Aggregation DatabaseEast AsianSub1618C=0.955T=0.045
The Genome Aggregation DatabaseEuropeSub18400C=0.913T=0.086
The Genome Aggregation DatabaseGlobalStudy-wide29848C=0.854T=0.145
The Genome Aggregation DatabaseOtherSub302C=0.840T=0.160
Trans-Omics for Precision MedicineGlobalStudy-wide29114C=0.817T=0.182
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.897T=0.103
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs95163750.000114alcohol consumption23743675

eQTL of rs9516375 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9516375 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.