rs9516386

Homo sapiens
C>G / C>T
None
Check p-value
SNV (Single Nucleotide Variation)
G=0066 (1988/29944,GnomAD)
G=0057 (283/5008,1000G)
G=0104 (402/3854,ALSPAC)
G=0103 (381/3708,TWINSUK)
chr13:87063482 (GRCh38.p7) (13q31.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.87063482C>G
GRCh38.p7 chr 13NC_000013.11:g.87063482C>T
GRCh37.p13 chr 13NC_000013.10:g.87715737C>G
GRCh37.p13 chr 13NC_000013.10:g.87715737C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.983G=0.017
1000GenomesAmericanSub694C=0.940G=0.060
1000GenomesEast AsianSub1008C=0.970G=0.030
1000GenomesEuropeSub1006C=0.908G=0.092
1000GenomesGlobalStudy-wide5008C=0.943G=0.057
1000GenomesSouth AsianSub978C=0.900G=0.100
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.896G=0.104
The Genome Aggregation DatabaseAfricanSub8716C=0.971T=0.000
The Genome Aggregation DatabaseAmericanSub836C=0.940T=0.00,
The Genome Aggregation DatabaseEast AsianSub1614C=0.954T=0.001
The Genome Aggregation DatabaseEuropeSub18476C=0.915T=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29944C=0.933T=0.000
The Genome Aggregation DatabaseOtherSub302C=0.850T=0.00,
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.897G=0.103
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs95163860.000115alcohol consumption23743675

eQTL of rs9516386 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
Chr13:87715737SLITRK5ENSG00000165300.6C>G7.2166e-3-609133Cerebellar_Hemisphere

meQTL of rs9516386 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.