rs9516430

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0067 (1964/29118,TOPMED)
G=0068 (1953/28690,GnomAD)
G=0061 (306/5008,1000G)
chr13:87086209 (GRCh38.p7) (13q31.1)
AD
GWASdb2
1   publication(s)
See rs on genome
9 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.87086209T>G
GRCh37.p13 chr 13NC_000013.10:g.87738464T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.981G=0.019
1000GenomesAmericanSub694T=0.940G=0.060
1000GenomesEast AsianSub1008T=0.968G=0.032
1000GenomesEuropeSub1006T=0.908G=0.092
1000GenomesGlobalStudy-wide5008T=0.939G=0.061
1000GenomesSouth AsianSub978T=0.890G=0.110
The Genome Aggregation DatabaseAfricanSub8572T=0.972G=0.028
The Genome Aggregation DatabaseAmericanSub630T=0.930G=0.070
The Genome Aggregation DatabaseEast AsianSub1620T=0.954G=0.046
The Genome Aggregation DatabaseEuropeSub17568T=0.911G=0.088
The Genome Aggregation DatabaseGlobalStudy-wide28690T=0.931G=0.068
The Genome Aggregation DatabaseOtherSub300T=0.850G=0.150
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.932G=0.067
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs95164300.000123alcohol consumption23743675

eQTL of rs9516430 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9516430 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr138778075187780970E07042287
chr138778099087781070E07042526
chr138778113987781194E07042675
chr138778136187781523E07042897
chr138778160987781698E07043145
chr138778189787782225E07043433
chr138778224887782420E07043784
chr138778273087782844E07044266
chr138778399687784117E07045532