SNP Detail Info-rs9524441

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0066 (1981/29796,GnomAD)
G=0068 (2000/29118,TOPMED)
G=0057 (283/5008,1000G)
G=0104 (401/3854,ALSPAC)
G=0102 (379/3708,TWINSUK)

Position: chr13:87065933 (GRCh38.p7) (13q31.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 13	NC_000013.11:g.87065933A>G
GRCh37.p13 chr 13	NC_000013.10:g.87718188A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.983	G=0.017
1000Genomes	American	Sub	694	A=0.940	G=0.060
1000Genomes	East Asian	Sub	1008	A=0.970	G=0.030
1000Genomes	Europe	Sub	1006	A=0.908	G=0.092
1000Genomes	Global	Study-wide	5008	A=0.943	G=0.057
1000Genomes	South Asian	Sub	978	A=0.900	G=0.100
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.896	G=0.104
The Genome Aggregation Database	African	Sub	8714	A=0.971	G=0.029
The Genome Aggregation Database	American	Sub	820	A=0.950	G=0.050
The Genome Aggregation Database	East Asian	Sub	1616	A=0.955	G=0.045
The Genome Aggregation Database	Europe	Sub	18344	A=0.914	G=0.085
The Genome Aggregation Database	Global	Study-wide	29796	A=0.933	G=0.066
The Genome Aggregation Database	Other	Sub	302	A=0.850	G=0.150
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.931	G=0.068
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.898	G=0.102

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs9524441	0.000113	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs9524441