rs9524536

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0136 (4098/29968,GnomAD)
C=0170 (4952/29118,TOPMED)
C=0129 (644/5008,1000G)
C=0102 (395/3854,ALSPAC)
C=0105 (388/3708,TWINSUK)
chr13:87088823 (GRCh38.p7) (13q31.1)
AD
GWASdb2
1   publication(s)
See rs on genome
9 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.87088823T>C
GRCh37.p13 chr 13NC_000013.10:g.87741078T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.744C=0.256
1000GenomesAmericanSub694T=0.910C=0.090
1000GenomesEast AsianSub1008T=0.968C=0.032
1000GenomesEuropeSub1006T=0.906C=0.094
1000GenomesGlobalStudy-wide5008T=0.871C=0.129
1000GenomesSouth AsianSub978T=0.880C=0.120
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.898C=0.102
The Genome Aggregation DatabaseAfricanSub8722T=0.735C=0.265
The Genome Aggregation DatabaseAmericanSub834T=0.920C=0.080
The Genome Aggregation DatabaseEast AsianSub1618T=0.954C=0.046
The Genome Aggregation DatabaseEuropeSub18492T=0.913C=0.086
The Genome Aggregation DatabaseGlobalStudy-wide29968T=0.863C=0.136
The Genome Aggregation DatabaseOtherSub302T=0.840C=0.160
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.829C=0.170
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.895C=0.105
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs95245360.000129alcohol consumption23743675

eQTL of rs9524536 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9524536 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr138778075187780970E07039673
chr138778099087781070E07039912
chr138778113987781194E07040061
chr138778136187781523E07040283
chr138778160987781698E07040531
chr138778189787782225E07040819
chr138778224887782420E07041170
chr138778273087782844E07041652
chr138778399687784117E07042918