rs9524574

Homo sapiens
A>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0123 (3685/29942,GnomAD)
C=0152 (4427/29118,TOPMED)
C=0117 (588/5008,1000G)
C=0104 (400/3854,ALSPAC)
C=0104 (385/3708,TWINSUK)
chr13:87095861 (GRCh38.p7) (13q31.1)
AD
GWASdb2
1   publication(s)
See rs on genome
9 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.87095861A>C
GRCh37.p13 chr 13NC_000013.10:g.87748116A>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.785C=0.215
1000GenomesAmericanSub694A=0.910C=0.090
1000GenomesEast AsianSub1008A=0.968C=0.032
1000GenomesEuropeSub1006A=0.906C=0.094
1000GenomesGlobalStudy-wide5008A=0.883C=0.117
1000GenomesSouth AsianSub978A=0.880C=0.120
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.896C=0.104
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.848C=0.152
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.896C=0.104
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs95245740.000119alcohol consumption23743675

eQTL of rs9524574 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9524574 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr138778075187780970E07032635
chr138778099087781070E07032874
chr138778113987781194E07033023
chr138778136187781523E07033245
chr138778160987781698E07033493
chr138778189787782225E07033781
chr138778224887782420E07034132
chr138778273087782844E07034614
chr138778399687784117E07035880