| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 13 | NC_000013.11:g.87105954A>G |
| GRCh37.p13 chr 13 | NC_000013.10:g.87758209A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.731 | G=0.269 |
| 1000Genomes | American | Sub | 694 | A=0.910 | G=0.090 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.965 | G=0.035 |
| 1000Genomes | Europe | Sub | 1006 | A=0.906 | G=0.094 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.868 | G=0.132 |
| 1000Genomes | South Asian | Sub | 978 | A=0.880 | G=0.120 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.896 | G=0.104 |
| The Genome Aggregation Database | African | Sub | 8724 | A=0.737 | G=0.263 |
| The Genome Aggregation Database | American | Sub | 836 | A=0.920 | G=0.080 |
| The Genome Aggregation Database | East Asian | Sub | 1616 | A=0.953 | G=0.047 |
| The Genome Aggregation Database | Europe | Sub | 18470 | A=0.913 | G=0.086 |
| The Genome Aggregation Database | Global | Study-wide | 29948 | A=0.863 | G=0.136 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.840 | G=0.160 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.829 | G=0.170 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.896 | G=0.104 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs9524600 | 0.00012 | alcohol consumption | 23743675 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr13 | 87780751 | 87780970 | E070 | 22542 |
| chr13 | 87780990 | 87781070 | E070 | 22781 |
| chr13 | 87781139 | 87781194 | E070 | 22930 |
| chr13 | 87781361 | 87781523 | E070 | 23152 |
| chr13 | 87781609 | 87781698 | E070 | 23400 |
| chr13 | 87781897 | 87782225 | E070 | 23688 |
| chr13 | 87782248 | 87782420 | E070 | 24039 |
| chr13 | 87782730 | 87782844 | E070 | 24521 |
| chr13 | 87783996 | 87784117 | E070 | 25787 |