rs9819865

Homo sapiens
G>A / G>C
None
Check p-value
SNV (Single Nucleotide Variation)
A=0276 (8279/29922,GnomAD)
A=0361 (10526/29118,TOPMED)
A=0319 (1599/5008,1000G)
A=0128 (492/3854,ALSPAC)
A=0125 (465/3708,TWINSUK)
chr3:24595033 (GRCh38.p7) (3p24.2)
AD
GWASdb2
1   publication(s)
See rs on genome
25 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.24595033G>A
GRCh38.p7 chr 3NC_000003.12:g.24595033G>C
GRCh37.p13 chr 3NC_000003.11:g.24636524G>A
GRCh37.p13 chr 3NC_000003.11:g.24636524G>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.305A=0.695
1000GenomesAmericanSub694G=0.810A=0.190
1000GenomesEast AsianSub1008G=0.834A=0.166
1000GenomesEuropeSub1006G=0.870A=0.130
1000GenomesGlobalStudy-wide5008G=0.681A=0.319
1000GenomesSouth AsianSub978G=0.750A=0.250
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.872A=0.128
The Genome Aggregation DatabaseAfricanSub8722G=0.362C=0.000
The Genome Aggregation DatabaseAmericanSub836G=0.780C=0.00,
The Genome Aggregation DatabaseEast AsianSub1598G=0.872C=0.000
The Genome Aggregation DatabaseEuropeSub18464G=0.878C=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29922G=0.723C=0.000
The Genome Aggregation DatabaseOtherSub302G=0.720C=0.00,
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.638A=0.361
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.875A=0.125
PMID Title Author Journal

P-Value

SNP ID p-value Traits Study
rs98198656.81E-05alcoholismpha002893

eQTL of rs9819865 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9819865 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr3172635924172636427E06711060
chr3172636429172637102E06711565
chr3172637198172637358E06712334
chr3172635924172636427E06911060
chr3172593875172594042E070-30822
chr3172594237172594335E070-30529
chr3172594440172594616E070-30248
chr3172635924172636427E07011060
chr3172636429172637102E07011565
chr3172637198172637358E07012334
chr3172634977172635044E07110113
chr3172635924172636427E07111060
chr3172636429172637102E07111565
chr3172635924172636427E07211060
chr3172636429172637102E07211565
chr3172637198172637358E07212334
chr3172635924172636427E07311060
chr3172635924172636427E07411060
chr3172636429172637102E07411565
chr3172637198172637358E07412334
chr3172631217172631346E0816353
chr3172631488172631612E0816624
chr3172634818172634939E0819954
chr3172634977172635044E08110113
chr3172635924172636427E08111060