SNP Detail Info-rs9825394

Organism: Homo sapiens

Alleles: T>C

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

C=0136 (4099/29952,GnomAD)
C=0174 (5072/29118,TOPMED)
C=0148 (741/5008,1000G)
C=0104 (400/3854,ALSPAC)
C=0106 (394/3708,TWINSUK)

Position: chr3:164834344 (GRCh38.p7) (3q26.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 3	NC_000003.12:g.164834344T>C
GRCh37.p13 chr 3	NC_000003.11:g.164552132T>C

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.722	C=0.278
1000Genomes	American	Sub	694	T=0.920	C=0.080
1000Genomes	East Asian	Sub	1008	T=0.905	C=0.095
1000Genomes	Europe	Sub	1006	T=0.907	C=0.093
1000Genomes	Global	Study-wide	5008	T=0.852	C=0.148
1000Genomes	South Asian	Sub	978	T=0.870	C=0.130
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.896	C=0.104
The Genome Aggregation Database	African	Sub	8702	T=0.744	C=0.256
The Genome Aggregation Database	American	Sub	838	T=0.940	C=0.060
The Genome Aggregation Database	East Asian	Sub	1620	T=0.898	C=0.102
The Genome Aggregation Database	Europe	Sub	18490	T=0.911	C=0.088
The Genome Aggregation Database	Global	Study-wide	29952	T=0.863	C=0.136
The Genome Aggregation Database	Other	Sub	302	T=0.910	C=0.090
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.825	C=0.174
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.894	C=0.106

rs9825394