rs9836943

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0405 (11913/29352,GnomAD)
G=0456 (13280/29118,TOPMED)
G=0484 (2425/5008,1000G)
G=0308 (1187/3854,ALSPAC)
G=0309 (1147/3708,TWINSUK)
chr3:72109884 (GRCh38.p7) (3p13)
AD
GWASdb2
1   publication(s)
See rs on genome
193 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.72109884T>G
GRCh37.p13 chr 3NC_000003.11:g.72159035T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.340G=0.660
1000GenomesAmericanSub694T=0.640G=0.360
1000GenomesEast AsianSub1008T=0.435G=0.565
1000GenomesEuropeSub1006T=0.668G=0.332
1000GenomesGlobalStudy-wide5008T=0.516G=0.484
1000GenomesSouth AsianSub978T=0.600G=0.400
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.692G=0.308
The Genome Aggregation DatabaseAfricanSub8556T=0.397G=0.603
The Genome Aggregation DatabaseAmericanSub822T=0.690G=0.310
The Genome Aggregation DatabaseEast AsianSub1592T=0.430G=0.570
The Genome Aggregation DatabaseEuropeSub18080T=0.698G=0.301
The Genome Aggregation DatabaseGlobalStudy-wide29352T=0.594G=0.405
The Genome Aggregation DatabaseOtherSub302T=0.520G=0.480
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.543G=0.456
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.691G=0.309
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs98369431.11E-05alcohol consumption23743675

eQTL of rs9836943 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9836943 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr37212063872120693E067-38342
chr37212077572120860E067-38175
chr37218752272187692E06728487
chr37219319172193241E06734156
chr37219329772193460E06734262
chr37219363272193843E06734597
chr37219393772194320E06734902
chr37219433972194517E06735304
chr37219456072195128E06735525
chr37219513072195222E06736095
chr37219525172195446E06736216
chr37220139372201527E06742358
chr37220413372204428E06745098
chr37220446772205190E06745432
chr37220614372206296E06747108
chr37220691772207061E06747882
chr37220749872207738E06748463
chr37212665772127568E068-31467
chr37212774772127804E068-31231
chr37213943572139568E068-19467
chr37219319172193241E06834156
chr37219329772193460E06834262
chr37219363272193843E06834597
chr37219393772194320E06834902
chr37219433972194517E06835304
chr37219456072195128E06835525
chr37219513072195222E06836095
chr37220139372201527E06842358
chr37220313272203331E06844097
chr37220346472203508E06844429
chr37220413372204428E06845098
chr37220446772205190E06845432
chr37220614372206296E06847108
chr37220691772207061E06847882
chr37220749872207738E06848463
chr37211448472114671E069-44364
chr37211488672115113E069-43922
chr37214823972148300E069-10735
chr37214832372148434E069-10601
chr37214851172149086E069-9949
chr37215363372153878E069-5157
chr37217817572178432E06919140
chr37219319172193241E06934156
chr37219329772193460E06934262
chr37219363272193843E06934597
chr37219393772194320E06934902
chr37219433972194517E06935304
chr37219456072195128E06935525
chr37219513072195222E06936095
chr37219525172195446E06936216
chr37219975372199826E06940718
chr37219985072199912E06940815
chr37219994672200991E06940911
chr37220139372201527E06942358
chr37220413372204428E06945098
chr37220446772205190E06945432
chr37220555972205731E06946524
chr37220614372206296E06947108
chr37220691772207061E06947882
chr37220749872207738E06948463
chr37212665772127568E070-31467
chr37212774772127804E070-31231
chr37216036472160414E0701329
chr37216049972160729E0701464
chr37218752272187692E07028487
chr37219363272193843E07034597
chr37219393772194320E07034902
chr37219433972194517E07035304
chr37219456072195128E07035525
chr37219513072195222E07036095
chr37219525172195446E07036216
chr37219569772195747E07036662
chr37219595872196015E07036923
chr37220139372201527E07042358
chr37211488672115113E071-43922
chr37211527472115506E071-43529
chr37211556072115723E071-43312
chr37212774772127804E071-31231
chr37212786172127940E071-31095
chr37212798172128178E071-30857
chr37213943572139568E071-19467
chr37213978472140143E071-18892
chr37215119272151760E071-7275
chr37215195272152006E071-7029
chr37215213372152305E071-6730
chr37215363372153878E071-5157
chr37218752272187692E07128487
chr37219048872191082E07131453
chr37219319172193241E07134156
chr37219329772193460E07134262
chr37219363272193843E07134597
chr37219393772194320E07134902
chr37219433972194517E07135304
chr37219456072195128E07135525
chr37219513072195222E07136095
chr37219975372199826E07140718
chr37219985072199912E07140815
chr37219994672200991E07140911
chr37220139372201527E07142358
chr37220313272203331E07144097
chr37220346472203508E07144429
chr37220413372204428E07145098
chr37220446772205190E07145432
chr37220555972205731E07146524
chr37220614372206296E07147108
chr37220691772207061E07147882
chr37220749872207738E07148463
chr37211448472114671E072-44364
chr37211488672115113E072-43922
chr37211527472115506E072-43529
chr37213943572139568E072-19467
chr37218752272187692E07228487
chr37219048872191082E07231453
chr37219253372192755E07233498
chr37219319172193241E07234156
chr37219329772193460E07234262
chr37219363272193843E07234597
chr37219393772194320E07234902
chr37219433972194517E07235304
chr37219456072195128E07235525
chr37219513072195222E07236095
chr37219525172195446E07236216
chr37219994672200991E07240911
chr37220139372201527E07242358
chr37220413372204428E07245098
chr37220446772205190E07245432
chr37220555972205731E07246524
chr37220614372206296E07247108
chr37220691772207061E07247882
chr37220749872207738E07248463
chr37220787072208341E07248835
chr37219319172193241E07334156
chr37219329772193460E07334262
chr37219363272193843E07334597
chr37219393772194320E07334902
chr37219433972194517E07335304
chr37219456072195128E07335525
chr37219513072195222E07336095
chr37219525172195446E07336216
chr37220139372201527E07342358
chr37220413372204428E07345098
chr37220446772205190E07345432
chr37220614372206296E07347108
chr37220691772207061E07347882
chr37211448472114671E074-44364
chr37211488672115113E074-43922
chr37211527472115506E074-43529
chr37211556072115723E074-43312
chr37213943572139568E074-19467
chr37213978472140143E074-18892
chr37215363372153878E074-5157
chr37218415672184583E07425121
chr37219048872191082E07431453
chr37219127172191408E07432236
chr37219319172193241E07434156
chr37219329772193460E07434262
chr37219363272193843E07434597
chr37219393772194320E07434902
chr37219433972194517E07435304
chr37219456072195128E07435525
chr37219513072195222E07436095
chr37219525172195446E07436216
chr37219994672200991E07440911
chr37220139372201527E07442358
chr37220313272203331E07444097
chr37220346472203508E07444429
chr37220413372204428E07445098
chr37220446772205190E07445432
chr37220555972205731E07446524
chr37220614372206296E07447108
chr37220749872207738E07448463
chr37212855672128947E081-30088
chr37216036472160414E0811329
chr37216049972160729E0811464
chr37217817572178432E08119140
chr37217869272179216E08119657
chr37217936872179446E08120333
chr37218415672184583E08125121
chr37219433972194517E08135304
chr37219456072195128E08135525
chr37219513072195222E08136095
chr37219525172195446E08136216
chr37219569772195747E08136662
chr37220139372201527E08142358
chr37212665772127568E082-31467
chr37212774772127804E082-31231
chr37216036472160414E0821329
chr37216049972160729E0821464
chr37219393772194320E08234902
chr37219433972194517E08235304
chr37219456072195128E08235525
chr37219513072195222E08236095
chr37220139372201527E08242358