rs9876981

Homo sapiens
G>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0022 (666/29968,GnomAD)
T=0031 (926/29118,TOPMED)
T=0022 (110/5008,1000G)
T=0000 (1/3854,ALSPAC)
T=0001 (3/3708,TWINSUK)
chr3:112885405 (GRCh38.p7) (3q13.2)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.112885405G>T
GRCh37.p13 chr 3NC_000003.11:g.112604252G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.921T=0.079
1000GenomesAmericanSub694G=0.990T=0.010
1000GenomesEast AsianSub1008G=1.000T=0.000
1000GenomesEuropeSub1006G=0.999T=0.001
1000GenomesGlobalStudy-wide5008G=0.978T=0.022
1000GenomesSouth AsianSub978G=1.000T=0.000
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=1.000T=0.000
The Genome Aggregation DatabaseAfricanSub8714G=0.926T=0.074
The Genome Aggregation DatabaseAmericanSub838G=0.990T=0.010
The Genome Aggregation DatabaseEast AsianSub1622G=1.000T=0.000
The Genome Aggregation DatabaseEuropeSub18492G=0.999T=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29968G=0.977T=0.022
The Genome Aggregation DatabaseOtherSub302G=1.000T=0.000
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.968T=0.031
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.999T=0.001
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs98769810.000818alcohol dependence21314694

eQTL of rs9876981 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9876981 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.