rs9897184

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
G==0402 (12061/29940,GnomAD)
A=0489 (14256/29118,TOPMED)
G==0417 (2090/5008,1000G)
G==0241 (929/3854,ALSPAC)
G==0242 (899/3708,TWINSUK)
chr17:74418622 (GRCh38.p7) (17q25.1)
AD
GWASdb2
1   publication(s)
See rs on genome
266 Enhancers around
8 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 17NC_000017.11:g.74418622G>A
GRCh37.p13 chr 17NC_000017.10:g.72414761G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.925A=0.075
1000GenomesAmericanSub694G=0.270A=0.730
1000GenomesEast AsianSub1008G=0.205A=0.795
1000GenomesEuropeSub1006G=0.207A=0.793
1000GenomesGlobalStudy-wide5008G=0.417A=0.583
1000GenomesSouth AsianSub978G=0.270A=0.730
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.241A=0.759
The Genome Aggregation DatabaseAfricanSub8706G=0.831A=0.169
The Genome Aggregation DatabaseAmericanSub838G=0.240A=0.760
The Genome Aggregation DatabaseEast AsianSub1614G=0.219A=0.781
The Genome Aggregation DatabaseEuropeSub18484G=0.226A=0.773
The Genome Aggregation DatabaseGlobalStudy-wide29940G=0.402A=0.597
The Genome Aggregation DatabaseOtherSub298G=0.270A=0.730
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.510A=0.489
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.242A=0.758
PMID Title Author Journal
24277619ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.Quillen EEAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs98971840.000188alcohol dependence24277619

eQTL of rs9897184 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9897184 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr177236861772368725E067-46036
chr177236877272368822E067-45939
chr177236989972370371E067-44390
chr177237051772370751E067-44010
chr177237075572370842E067-43919
chr177237102872371179E067-43582
chr177238905072389307E067-25454
chr177238936672389434E067-25327
chr177238949772389921E067-24840
chr177239020472390254E067-24507
chr177239031672390560E067-24201
chr177243848172438667E06723720
chr177243867972440143E06723918
chr177244018872440330E06725427
chr177244900072451876E06734239
chr177245322072454251E06738459
chr177236534872365447E068-49314
chr177236989972370371E068-44390
chr177237051772370751E068-44010
chr177237075572370842E068-43919
chr177237102872371179E068-43582
chr177237549072377368E068-37393
chr177238842772388540E068-26221
chr177238905072389307E068-25454
chr177238936672389434E068-25327
chr177238949772389921E068-24840
chr177239020472390254E068-24507
chr177239031672390560E068-24201
chr177242314272424102E0688381
chr177243186272432169E06817101
chr177243224572432431E06817484
chr177243867972440143E06823918
chr177244018872440330E06825427
chr177244034772440971E06825586
chr177244900072451876E06834239
chr177236534872365447E069-49314
chr177236547872365825E069-48936
chr177236877272368822E069-45939
chr177236989972370371E069-44390
chr177237051772370751E069-44010
chr177237075572370842E069-43919
chr177237102872371179E069-43582
chr177238905072389307E069-25454
chr177238936672389434E069-25327
chr177238949772389921E069-24840
chr177239020472390254E069-24507
chr177239031672390560E069-24201
chr177242413972424293E0699378
chr177243848172438667E06923720
chr177243867972440143E06923918
chr177244018872440330E06925427
chr177244034772440971E06925586
chr177244145772441607E06926696
chr177244265472443477E06927893
chr177244352972443587E06928768
chr177245322072454251E06938459
chr177237480872375185E070-39576
chr177237532372375391E070-39370
chr177237549072377368E070-37393
chr177237746272377620E070-37141
chr177237764872377768E070-36993
chr177243867972440143E07023918
chr177245187972452629E07037118
chr177245301572453167E07038254
chr177245322072454251E07038459
chr177236534872365447E071-49314
chr177236861772368725E071-46036
chr177236877272368822E071-45939
chr177236989972370371E071-44390
chr177237051772370751E071-44010
chr177237075572370842E071-43919
chr177237102872371179E071-43582
chr177237126472371325E071-43436
chr177237549072377368E071-37393
chr177239020472390254E071-24507
chr177239031672390560E071-24201
chr177242082072421176E0716059
chr177242257172422683E0717810
chr177242272972422854E0717968
chr177242301372423068E0718252
chr177242314272424102E0718381
chr177242413972424293E0719378
chr177243034372430745E07115582
chr177243545872435508E07120697
chr177243848172438667E07123720
chr177243867972440143E07123918
chr177244018872440330E07125427
chr177244034772440971E07125586
chr177244122672441298E07126465
chr177244145772441607E07126696
chr177244170372441827E07126942
chr177244187272441945E07127111
chr177244195672442040E07127195
chr177244265472443477E07127893
chr177244352972443587E07128768
chr177244362172443720E07128860
chr177244373572443835E07128974
chr177245322072454251E07138459
chr177236534872365447E072-49314
chr177236989972370371E072-44390
chr177237051772370751E072-44010
chr177237075572370842E072-43919
chr177237102872371179E072-43582
chr177237126472371325E072-43436
chr177239973472399930E072-14831
chr177239995972400014E072-14747
chr177240002772400117E072-14644
chr177240017772400317E072-14444
chr177242071872420806E0725957
chr177242082072421176E0726059
chr177243034372430745E07215582
chr177243347272433526E07218711
chr177243848172438667E07223720
chr177243867972440143E07223918
chr177244018872440330E07225427
chr177244034772440971E07225586
chr177244814972448971E07233388
chr177244900072451876E07234239
chr177245322072454251E07238459
chr177236534872365447E073-49314
chr177236989972370371E073-44390
chr177237051772370751E073-44010
chr177237075572370842E073-43919
chr177237102872371179E073-43582
chr177239020472390254E073-24507
chr177239031672390560E073-24201
chr177239056372390643E073-24118
chr177239067572390719E073-24042
chr177239076872390808E073-23953
chr177239973472399930E073-14831
chr177239995972400014E073-14747
chr177240002772400117E073-14644
chr177240017772400317E073-14444
chr177242314272424102E0738381
chr177242413972424293E0739378
chr177243524272435297E07320481
chr177243545872435508E07320697
chr177243848172438667E07323720
chr177243867972440143E07323918
chr177244018872440330E07325427
chr177244034772440971E07325586
chr177244122672441298E07326465
chr177244145772441607E07326696
chr177244170372441827E07326942
chr177244187272441945E07327111
chr177244195672442040E07327195
chr177244220372442271E07327442
chr177244265472443477E07327893
chr177244578872445894E07331027
chr177244592172446060E07331160
chr177244611672446202E07331355
chr177244632972446369E07331568
chr177244645772446537E07331696
chr177244658372446814E07331822
chr177244685572446929E07332094
chr177244697372447137E07332212
chr177244720772447635E07332446
chr177244764172447790E07332880
chr177244798272448140E07333221
chr177244814972448971E07333388
chr177244900072451876E07334239
chr177245187972452629E07337118
chr177245301572453167E07338254
chr177236534872365447E074-49314
chr177236877272368822E074-45939
chr177236989972370371E074-44390
chr177237051772370751E074-44010
chr177237075572370842E074-43919
chr177237102872371179E074-43582
chr177237549072377368E074-37393
chr177239076872390808E074-23953
chr177239083072391658E074-23103
chr177239973472399930E074-14831
chr177239995972400014E074-14747
chr177240002772400117E074-14644
chr177240017772400317E074-14444
chr177242071872420806E0745957
chr177242082072421176E0746059
chr177242301372423068E0748252
chr177243034372430745E07415582
chr177243186272432169E07417101
chr177243224572432431E07417484
chr177243257572433028E07417814
chr177243867972440143E07423918
chr177244018872440330E07425427
chr177244034772440971E07425586
chr177244122672441298E07426465
chr177244145772441607E07426696
chr177244352972443587E07428768
chr177244362172443720E07428860
chr177244373572443835E07428974
chr177244388472444167E07429123
chr177244535672445419E07430595
chr177244554372445698E07430782
chr177244578872445894E07431027
chr177244592172446060E07431160
chr177244611672446202E07431355
chr177244632972446369E07431568
chr177244814972448971E07433388
chr177244900072451876E07434239
chr177245322072454251E07438459
chr177237532372375391E081-39370
chr177237549072377368E081-37393
chr177238496472385956E081-28805
chr177238905072389307E081-25454
chr177238936672389434E081-25327
chr177238949772389921E081-24840
chr177239020472390254E081-24507
chr177239031672390560E081-24201
chr177239056372390643E081-24118
chr177239067572390719E081-24042
chr177239076872390808E081-23953
chr177239083072391658E081-23103
chr177239212372392173E081-22588
chr177239973472399930E081-14831
chr177239995972400014E081-14747
chr177240002772400117E081-14644
chr177240017772400317E081-14444
chr177240034272401285E081-13476
chr177243867972440143E08123918
chr177244018872440330E08125427
chr177244034772440971E08125586
chr177244814972448971E08133388
chr177244900072451876E08134239
chr177245187972452629E08137118
chr177245301572453167E08138254
chr177245322072454251E08138459
chr177245430672454372E08139545
chr177245439272454432E08139631
chr177245447172454664E08139710
chr177245470572454770E08139944
chr177245490572455011E08140144
chr177245504072455363E08140279
chr177245569672455757E08140935
chr177245593172456023E08141170
chr177245613772456191E08141376
chr177245625772456443E08141496
chr177245645872456647E08141697
chr177245671672456967E08141955
chr177245748872457575E08142727
chr177245773772458035E08142976
chr177245807672458224E08143315
chr177237549072377368E082-37393
chr177238842772388540E082-26221
chr177238905072389307E082-25454
chr177238936672389434E082-25327
chr177238949772389921E082-24840
chr177239020472390254E082-24507
chr177239031672390560E082-24201
chr177239056372390643E082-24118
chr177239067572390719E082-24042
chr177239076872390808E082-23953
chr177239083072391658E082-23103
chr177239973472399930E082-14831
chr177239995972400014E082-14747
chr177240002772400117E082-14644
chr177240017772400317E082-14444
chr177243867972440143E08223918
chr177245187972452629E08237118
chr177245301572453167E08238254
chr177245322072454251E08238459
chr177245593172456023E08241170
chr177245613772456191E08241376
chr177245625772456443E08241496
chr177245645872456647E08241697
chr177245671672456967E08241955










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr177242567472430309E06810913
chr177246334772464147E06848586
chr177246334772464147E07148586
chr177242567472430309E07210913
chr177242567472430309E07310913
chr177246334772464147E07348586
chr177242567472430309E07410913
chr177242567472430309E08210913