DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APAAAVPPA
Uniprot ID:
O95104
Source protein:
SR-related and CTD-associated factor 4
Source gene:
SCAF4
Class:
DEG_SIAH_1
Location:
289:297
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9955
ASA_SCORE:
81.1889
COIL:
0.9508
CONS_SCORE:
0.2346
DSS_SCORE:
0.5565
HELIX:
0.0338
FCONS_SCORE:
0.8842
RIG_SCORE:
0.6741
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A306T
TCGA-BR-7851
STAD
TCGA
APAAAVPPA
DEG_SIAH_1
0.0833
p.A306T
DO38711
STAD
ICGC
APAAAVPPA
DEG_SIAH_1
0.0833
p.A306D
DO228948
LICA
ICGC
APAAAVPPA
DEG_SIAH_1
0.0833
p.P298H
DO229035
LICA
ICGC
APAAAVPPA
DEG_SIAH_1
0.3056
p.A300T
SIDM00216
Colorectal Carcinoma
GDSC
APAAAVPPA
DEG_SIAH_1
0.25
p.A300T
ACH-000989
Colon/Colorectal Cancer
CCLE
APAAAVPPA
DEG_SIAH_1
0.25
p.A300T
SNU-175
large_intestine
COSMIC
APAAAVPPA
DEG_SIAH_1
0.25
p.K279Q
SIDM00754
Non-Small Cell Lung Carcinoma
GDSC
APAAAVPPA
DEG_SIAH_1
0.1667
p.K279Q
ACH-000379
Lung Cancer
CCLE
APAAAVPPA
DEG_SIAH_1
0.1667
p.K279Q
NCI-H1781
lung
COSMIC
APAAAVPPA
DEG_SIAH_1
0.1667
p.P298L
SIDM00516
Melanoma
GDSC
APAAAVPPA
DEG_SIAH_1
0.3056
p.P298L
ACH-002166
Skin Cancer
CCLE
APAAAVPPA
DEG_SIAH_1
0.3056
p.P298L
MZ7-mel
skin
COSMIC
APAAAVPPA
DEG_SIAH_1
0.3056
p.A304D
ACH-002061
Leukemia
CCLE
APAAAVPPA
DEG_SIAH_1
0.1389
p.P283L
MZ7-mel
skin
COSMIC
APAAAVPPA
DEG_SIAH_1
0.1667
p.A294T
H2869
pleura
COSMIC
APAAAVPPA
DEG_SIAH_1
0.7139
Drug responses associated with SCAF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APAAAVPPA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95104
SR-related and CTD-associated factor 4
DEG_SIAH_1
289:297
APAAAVPPA
SIAH1,SIAH2,SIAH3
0.9955
More...