DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APAAAVSPM
Uniprot ID:
Q5M775
Source protein:
Cytospin-B
Source gene:
SPECC1
Class:
DEG_SIAH_1
Location:
857:865
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9954
ASA_SCORE:
74.3556
COIL:
0.8139
CONS_SCORE:
0.4211
DSS_SCORE:
0.5507
HELIX:
0.126
FCONS_SCORE:
0.9779
RIG_SCORE:
0.6748
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A859T
TCGA-AJ-A2QO
UCEC
TCGA
APAAAVSPM
DEG_SIAH_1
0.6028
p.A859T
DO42177
UCEC
ICGC
APAAAVSPM
DEG_SIAH_1
0.6028
p.R867S
TCGA-AP-A1DV
UCEC
TCGA
APAAAVSPM
DEG_SIAH_1
0.2778
p.R867S
DO43186
UCEC
ICGC
APAAAVSPM
DEG_SIAH_1
0.2778
p.R875Q
TCGA-D5-6927
COAD
TCGA
APAAAVSPM
DEG_SIAH_1
0.0556
p.R875Q
DO10332
COAD
ICGC
APAAAVSPM
DEG_SIAH_1
0.0556
p.V862F
TCGA-ER-A19P
SKCM
TCGA
APAAAVSPM
DEG_SIAH_1
0.7068
p.V862F
DO47623
SKCM
ICGC
APAAAVSPM
DEG_SIAH_1
0.7068
p.S872I
TCGA-IB-7651
PAAD
TCGA
APAAAVSPM
DEG_SIAH_1
0.1389
p.S872I
DO46657
PAAD
ICGC
APAAAVSPM
DEG_SIAH_1
0.1389
p.S872N
TCGA-R5-A7ZI
STAD
TCGA
APAAAVSPM
DEG_SIAH_1
0.1389
p.S872N
DO222342
STAD
ICGC
APAAAVSPM
DEG_SIAH_1
0.1389
p.V862G
DO18164
KIRC
ICGC
APAAAVSPM
DEG_SIAH_1
0.7532
p.R875W
DO228916
LICA
ICGC
APAAAVSPM
DEG_SIAH_1
0.0556
p.R875W
SIDM01617
Endometrial Carcinoma
GDSC
APAAAVSPM
DEG_SIAH_1
0.0556
p.R875W
ACH-000994
Endometrial/Uterine Cancer
CCLE
APAAAVSPM
DEG_SIAH_1
0.0556
p.R875P
DO229459
SKCA
ICGC
APAAAVSPM
DEG_SIAH_1
0.0556
p.E867K
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
APAAAVSPM
DEG_SIAH_1
0.2778
p.A873V
SNU-175
large_intestine
COSMIC
APAAAVSPM
DEG_SIAH_1
0.5556
Drug responses associated with SPECC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APAAAVSPM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5M775
Cytospin-B
DEG_SIAH_1
857:865
APAAAVSPM
SIAH1,SIAH2,SIAH3
0.9954
More...