DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APAATVAPQ
Uniprot ID:
P25940
Source protein:
Collagen alpha-3
Source gene:
COL5A3
Class:
DEG_SIAH_1
Location:
228:236
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9778
ASA_SCORE:
67.3556
COIL:
0.8616
CONS_SCORE:
0.2423
DSS_SCORE:
0.6121
HELIX:
0.0694
FCONS_SCORE:
0.9224
RIG_SCORE:
0.6758
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R243H
TCGA-49-6743
LUAD
TCGA
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
DO234340
ESAD
ICGC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
DO26092
LUAD
ICGC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00371
Pancreatic Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00544
Neuroblastoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00567
Other Solid Cancers
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00612
Glioma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00997
Thyroid Gland Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00618
Hepatocellular Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM00469
Pancreatic Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM01498
Acute Myeloid Leukemia
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM01660
Kidney Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243H
SIDM01762
Esophageal Squamous Cell Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243C
TCGA-97-7546
LUAD
TCGA
APAATVAPQ
DEG_SIAH_1
0.1389
p.R243C
DO23762
LUAD
ICGC
APAATVAPQ
DEG_SIAH_1
0.1389
p.D223N
TCGA-B5-A0JY
UCEC
TCGA
APAATVAPQ
DEG_SIAH_1
0.1944
p.D223N
DO43041
UCEC
ICGC
APAATVAPQ
DEG_SIAH_1
0.1944
p.A230T
TCGA-CA-6717
COAD
TCGA
APAATVAPQ
DEG_SIAH_1
0.6028
p.A230T
TCGA-FR-A8YC
SKCM
TCGA
APAATVAPQ
DEG_SIAH_1
0.6028
p.A230T
DO8264
COAD
ICGC
APAATVAPQ
DEG_SIAH_1
0.6028
p.A230T
DO50301
SKCM
ICGC
APAATVAPQ
DEG_SIAH_1
0.6028
p.P244S
TCGA-D9-A6EC
SKCM
TCGA
APAATVAPQ
DEG_SIAH_1
0.1111
p.P244S
TCGA-FW-A3R5
SKCM
TCGA
APAATVAPQ
DEG_SIAH_1
0.1111
p.P244S
DO37406
SKCM
ICGC
APAATVAPQ
DEG_SIAH_1
0.1111
p.P244S
DO50291
SKCM
ICGC
APAATVAPQ
DEG_SIAH_1
0.1111
p.R219W
TCGA-DE-A4MB
THCA
TCGA
APAATVAPQ
DEG_SIAH_1
0.0833
p.R219W
DO38964
THCA
ICGC
APAATVAPQ
DEG_SIAH_1
0.0833
p.Q236E
TCGA-E3-A3E3
THCA
TCGA
APAATVAPQ
DEG_SIAH_1
0.5633
p.Q236E
DO38927
THCA
ICGC
APAATVAPQ
DEG_SIAH_1
0.5633
p.V233L
TCGA-EO-A22X
UCEC
TCGA
APAATVAPQ
DEG_SIAH_1
0.6765
p.V233L
DO43907
UCEC
ICGC
APAATVAPQ
DEG_SIAH_1
0.6765
p.P244L
TCGA-FW-A3R5
SKCM
TCGA
APAATVAPQ
DEG_SIAH_1
0.1111
p.P244L
DO37406
SKCM
ICGC
APAATVAPQ
DEG_SIAH_1
0.1111
p.R245W
DO224598
BRCA
ICGC
APAATVAPQ
DEG_SIAH_1
0.0833
p.R245W
DO1010
BRCA
ICGC
APAATVAPQ
DEG_SIAH_1
0.0833
p.R246W
DO228129
EOPC
ICGC
APAATVAPQ
DEG_SIAH_1
0.0556
p.R219Q
DO222285
GACA
ICGC
APAATVAPQ
DEG_SIAH_1
0.0833
p.A234D
DO229029
LICA
ICGC
APAATVAPQ
DEG_SIAH_1
0.6682
p.T232K
DO229022
LICA
ICGC
APAATVAPQ
DEG_SIAH_1
0.6195
p.A228E
DO229041
LICA
ICGC
APAATVAPQ
DEG_SIAH_1
0.659
p.P235S
DO220862
MELA
ICGC
APAATVAPQ
DEG_SIAH_1
0.6752
p.R245Q
SIDM02049
Pancreatic Carcinoma
GDSC
APAATVAPQ
DEG_SIAH_1
0.0833
Drug responses associated with COL5A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APAATVAPQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25940
Collagen alpha-3
DEG_SIAH_1
228:236
APAATVAPQ
SIAH1,SIAH2,SIAH3
0.9778
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