DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APAAVVPPT
Uniprot ID:
P10515
Source protein:
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
Source gene:
DLAT
Class:
DEG_SIAH_1
Location:
400:408
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9744
ASA_SCORE:
89.4222
COIL:
0.9661
CONS_SCORE:
0.3364
DSS_SCORE:
0.4654
HELIX:
0.0136
FCONS_SCORE:
0.9383
RIG_SCORE:
0.6852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T417A
TCGA-55-6985
LUAD
TCGA
APAAVVPPT
DEG_SIAH_1
0.0833
p.T417A
DO25659
LUAD
ICGC
APAAVVPPT
DEG_SIAH_1
0.0833
p.G409R
TCGA-86-8585
LUAD
TCGA
APAAVVPPT
DEG_SIAH_1
0.3056
p.G411V
TCGA-A5-A0G1
UCEC
TCGA
APAAVVPPT
DEG_SIAH_1
0.25
p.P401A
TCGA-B0-5104
KIRC
TCGA
APAAVVPPT
DEG_SIAH_1
0.7503
p.P401A
DO16955
KIRC
ICGC
APAAVVPPT
DEG_SIAH_1
0.7503
p.T408P
TCGA-CN-A49B
HNSC
TCGA
APAAVVPPT
DEG_SIAH_1
0.7031
p.S391F
TCGA-EE-A29E
SKCM
TCGA
APAAVVPPT
DEG_SIAH_1
0.5278
p.D390N
TCGA-EO-A22U
UCEC
TCGA
APAAVVPPT
DEG_SIAH_1
0.0556
p.V415A
TCGA-GF-A6C9
SKCM
TCGA
APAAVVPPT
DEG_SIAH_1
0.1389
p.H402D
DO1076
BRCA
ICGC
APAAVVPPT
DEG_SIAH_1
0.7688
p.A414T
DO1608
BRCA
ICGC
APAAVVPPT
DEG_SIAH_1
0.1667
p.D395Y
DO228952
LICA
ICGC
APAAVVPPT
DEG_SIAH_1
0.1944
p.S411N
DO46657
PAAD
ICGC
APAAVVPPT
DEG_SIAH_1
0.25
p.P410R
SIDM00216
Colorectal Carcinoma
GDSC
APAAVVPPT
DEG_SIAH_1
0.2778
p.P410R
SIDM01582
Gastric Carcinoma
GDSC
APAAVVPPT
DEG_SIAH_1
0.2778
p.H402Y
ACH-001358
Breast Cancer
CCLE
APAAVVPPT
DEG_SIAH_1
0.7229
p.H402Y
MDA-MB-330
breast
COSMIC
APAAVVPPT
DEG_SIAH_1
0.7229
Drug responses associated with DLAT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APAAVVPPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10515
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
DEG_SIAH_1
400:408
APAAVVPPT
SIAH1,SIAH2,SIAH3
0.9744
More...