DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APYATVAPS
Uniprot ID:
Q8WU58
Source protein:
Protein FAM222B
Source gene:
FAM222B
Class:
DEG_SIAH_1
Location:
134:142
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9609
ASA_SCORE:
81.8111
COIL:
0.9236
CONS_SCORE:
0.6885
DSS_SCORE:
0.4047
HELIX:
0.0478
FCONS_SCORE:
0.9106
RIG_SCORE:
0.7326
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H146Q
TCGA-GM-A2DH
BRCA
TCGA
APYATVAPS
DEG_SIAH_1
0.2222
p.H146Q
DO3317
BRCA
ICGC
APYATVAPS
DEG_SIAH_1
0.2222
p.P125S
TCGA-W3-A828
SKCM
TCGA
APYATVAPS
DEG_SIAH_1
0.0833
p.P125S
DO51273
SKCM
ICGC
APYATVAPS
DEG_SIAH_1
0.0833
p.P131T
DO228948
LICA
ICGC
APYATVAPS
DEG_SIAH_1
0.25
p.A140E
DO229015
LICA
ICGC
APYATVAPS
DEG_SIAH_1
0.659
p.Q148P
DO219881
SKCA
ICGC
APYATVAPS
DEG_SIAH_1
0.1667
p.Q148P
DO218888
SKCA
ICGC
APYATVAPS
DEG_SIAH_1
0.1667
p.E126K
SIDM00963
Breast Carcinoma
GDSC
APYATVAPS
DEG_SIAH_1
0.1111
p.E126K
ACH-000927
Breast Cancer
CCLE
APYATVAPS
DEG_SIAH_1
0.1111
p.E126K
BT-474
breast
COSMIC
APYATVAPS
DEG_SIAH_1
0.1111
p.A140T
SIDM00920
Breast Carcinoma
GDSC
APYATVAPS
DEG_SIAH_1
0.6028
p.A140T
ACH-000783
Breast Cancer
CCLE
APYATVAPS
DEG_SIAH_1
0.6028
p.A140T
CAMA-1
breast
COSMIC
APYATVAPS
DEG_SIAH_1
0.6028
p.H146P
ACH-002181
Ovarian Cancer
CCLE
APYATVAPS
DEG_SIAH_1
0.2222
Drug responses associated with FAM222B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APYATVAPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WU58
Protein FAM222B
DEG_SIAH_1
134:142
APYATVAPS
SIAH1,SIAH2,SIAH3
0.9609
More...