DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARKDLKFVS
Uniprot ID:
Q12986
Source protein:
Transcriptional repressor NF-X1
Source gene:
NFX1
Class:
DEG_APCC_DBOX_1
Location:
990:998
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8214
ASA_SCORE:
61.5667
COIL:
0.1857
CONS_SCORE:
0.3772
DSS_SCORE:
0.3569
HELIX:
0.8136
FCONS_SCORE:
1.0082
RIG_SCORE:
0.7827
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1007I
TCGA-55-6979
LUAD
TCGA
ARKDLKFVS
DEG_APCC_DBOX_1
0.0833
p.L1007I
DO24110
LUAD
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.0833
p.V1008M
TCGA-95-7039
LUAD
TCGA
ARKDLKFVS
DEG_APCC_DBOX_1
0.0556
p.V1008M
DO23907
LUAD
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.0556
p.V1008M
SIDM00454
Rhabdomyosarcoma
GDSC
ARKDLKFVS
DEG_APCC_DBOX_1
0.0556
p.V1008M
ACH-000689
Sarcoma
CCLE
ARKDLKFVS
DEG_APCC_DBOX_1
0.0556
p.V1008M
RH-18
soft_tissue
COSMIC
ARKDLKFVS
DEG_APCC_DBOX_1
0.0556
p.S983I
TCGA-D8-A1JM
BRCA
TCGA
ARKDLKFVS
DEG_APCC_DBOX_1
0.1389
p.S983I
DO2497
BRCA
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.1389
p.A990T
TCGA-L5-A8NE
ESCA
TCGA
ARKDLKFVS
DEG_APCC_DBOX_1
0.6028
p.K992N
TCGA-VS-A9UA
CESC
TCGA
ARKDLKFVS
DEG_APCC_DBOX_1
0.5806
p.K992N
DO219730
CESC
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.5806
p.V1000F
DO229031
LICA
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.2778
p.K995N
DO229037
LICA
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.5806
p.V997F
DO229037
LICA
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.7068
p.M1004I
DO45207
LIRI
ICGC
ARKDLKFVS
DEG_APCC_DBOX_1
0.1667
p.K981T
SIDM00193
Colorectal Carcinoma
GDSC
ARKDLKFVS
DEG_APCC_DBOX_1
0.5278
p.K981T
ACH-000991
Colon/Colorectal Cancer
CCLE
ARKDLKFVS
DEG_APCC_DBOX_1
0.5278
p.K981T
SNU-81
large_intestine
COSMIC
ARKDLKFVS
DEG_APCC_DBOX_1
0.5278
p.V1000I
SIDM00259
Neuroblastoma
GDSC
ARKDLKFVS
DEG_APCC_DBOX_1
0.2778
p.V1000I
SIDM00121
T-Lymphoblastic Leukemia
GDSC
ARKDLKFVS
DEG_APCC_DBOX_1
0.2778
p.V1000I
SIDM00145
T-Lymphoblastic Leukemia
GDSC
ARKDLKFVS
DEG_APCC_DBOX_1
0.2778
Drug responses associated with NFX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARKDLKFVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12986
Transcriptional repressor NF-X1
DEG_APCC_DBOX_1
990:998
ARKDLKFVS
APC,CDC20,FZR1
0.8214
More...