DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ARLDLPKIR
Uniprot ID:
Q5VV42
Source protein:
Threonylcarbamoyladenosine tRNA methylthiotransferase
Source gene:
CDKAL1
Class:
DEG_APCC_DBOX_1
Location:
192:200
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8427
ASA_SCORE:
80.9556
COIL:
0.8066
CONS_SCORE:
0.6134
DSS_SCORE:
0.286
HELIX:
0.0464
FCONS_SCORE:
1.3047
RIG_SCORE:
0.8223
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R187M
TCGA-A5-A0G1
UCEC
TCGA
ARLDLPKIR
DEG_APCC_DBOX_1
0.1944
p.R187M
DO42472
UCEC
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.1944
p.S209F
TCGA-CG-5720
STAD
TCGA
ARLDLPKIR
DEG_APCC_DBOX_1
0.0833
p.S209F
TCGA-D3-A3ML
SKCM
TCGA
ARLDLPKIR
DEG_APCC_DBOX_1
0.0833
p.S209F
DO47413
SKCM
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.0833
p.S209F
DO38623
STAD
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.0833
p.R200K
TCGA-D1-A1NY
UCEC
TCGA
ARLDLPKIR
DEG_APCC_DBOX_1
0.6126
p.R200K
DO42512
UCEC
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.6126
p.R188Q
DO225365
BRCA
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.2222
p.R188Q
DO229018
LICA
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.2222
p.R193Q
DO218068
GACA
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.7329
p.R193Q
SIDM01118
Small Cell Lung Carcinoma
GDSC
ARLDLPKIR
DEG_APCC_DBOX_1
0.7329
p.R193Q
ACH-002175
Lung Cancer
CCLE
ARLDLPKIR
DEG_APCC_DBOX_1
0.7329
p.R193Q
NCI-H740
lung
COSMIC
ARLDLPKIR
DEG_APCC_DBOX_1
0.7329
p.R193P
DO48759
LIRI
ICGC
ARLDLPKIR
DEG_APCC_DBOX_1
0.7512
p.I208T
SIDM01040
Ovarian Carcinoma
GDSC
ARLDLPKIR
DEG_APCC_DBOX_1
0.1111
p.I208T
ACH-000574
Ovarian Cancer
CCLE
ARLDLPKIR
DEG_APCC_DBOX_1
0.1111
p.I208T
FU-OV-1
ovary
COSMIC
ARLDLPKIR
DEG_APCC_DBOX_1
0.1111
p.I199M
SIDM01778
B-Cell Non-Hodgkin's Lymphoma
GDSC
ARLDLPKIR
DEG_APCC_DBOX_1
0.6507
p.I199M
ACH-000158
Lymphoma
CCLE
ARLDLPKIR
DEG_APCC_DBOX_1
0.6507
Drug responses associated with CDKAL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARLDLPKIR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VV42
Threonylcarbamoyladenosine tRNA methylthiotransferase
DEG_APCC_DBOX_1
192:200
ARLDLPKIR
APC,CDC20,FZR1
0.8427
More...