DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARLGLSTVT
Uniprot ID:
Q5VYM1
Source protein:
Uncharacterized protein C9orf131
Source gene:
C9orf131
Class:
DEG_APCC_DBOX_1
Location:
961:969
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9565
ASA_SCORE:
87.1333
COIL:
0.8683
CONS_SCORE:
0.7988
DSS_SCORE:
0.7248
HELIX:
0.073
FCONS_SCORE:
1.116
RIG_SCORE:
0.6562
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G959E
TCGA-IH-A3EA
SKCM
TCGA
ARLGLSTVT
DEG_APCC_DBOX_1
0.2778
p.P957A
DO225305
BRCA
ICGC
ARLGLSTVT
DEG_APCC_DBOX_1
0.2222
p.L960F
DO52458
COCA
ICGC
ARLGLSTVT
DEG_APCC_DBOX_1
0.75
p.P967T
DO50006
HNSC
ICGC
ARLGLSTVT
DEG_APCC_DBOX_1
0.7031
p.P967T
DO26566
LUSC
ICGC
ARLGLSTVT
DEG_APCC_DBOX_1
0.7031
p.P957H
DO23738
LUAD
ICGC
ARLGLSTVT
DEG_APCC_DBOX_1
0.2222
p.G966S
DO37447
SKCM
ICGC
ARLGLSTVT
DEG_APCC_DBOX_1
0.6993
Drug responses associated with C9orf131 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARLGLSTVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VYM1
Uncharacterized protein C9orf131
DEG_APCC_DBOX_1
961:969
ARLGLSTVT
APC,CDC20,FZR1
0.9565
More...