DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARMRLESLS
Uniprot ID:
Q03252
Source protein:
Lamin-B2
Source gene:
LMNB2
Class:
DEG_APCC_DBOX_1
Location:
310:318
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.758
ASA_SCORE:
86.3667
COIL:
0.0203
CONS_SCORE:
0.5203
DSS_SCORE:
0.3763
HELIX:
0.9802
FCONS_SCORE:
1.1012
RIG_SCORE:
0.7553
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R313C
TCGA-L5-A4OI
ESCA
TCGA
ARMRLESLS
DEG_APCC_DBOX_1
0.719
p.R304H
TCGA-OR-A5JA
ACC
TCGA
ARMRLESLS
DEG_APCC_DBOX_1
0.1667
p.R304H
SIDM01169
Ovarian Carcinoma
GDSC
ARMRLESLS
DEG_APCC_DBOX_1
0.1667
p.R304H
TOV-21G
ovary
COSMIC
ARMRLESLS
DEG_APCC_DBOX_1
0.1667
p.R316W
DO8730
COAD
ICGC
ARMRLESLS
DEG_APCC_DBOX_1
0.8634
p.R316W
DO220913
MELA
ICGC
ARMRLESLS
DEG_APCC_DBOX_1
0.8634
p.A310V
DO51407
PRAD
ICGC
ARMRLESLS
DEG_APCC_DBOX_1
0.5825
p.A321V
DO37911
SKCM
ICGC
ARMRLESLS
DEG_APCC_DBOX_1
0.25
p.R304C
SIDM00955
Melanoma
GDSC
ARMRLESLS
DEG_APCC_DBOX_1
0.1667
p.R304C
COLO-783
skin
COSMIC
ARMRLESLS
DEG_APCC_DBOX_1
0.1667
p.A300V
SIDM00282
Colorectal Carcinoma
GDSC
ARMRLESLS
DEG_APCC_DBOX_1
0.0556
p.A300V
ACH-000998
Colon/Colorectal Cancer
CCLE
ARMRLESLS
DEG_APCC_DBOX_1
0.0556
p.A300V
CW-2
large_intestine
COSMIC
ARMRLESLS
DEG_APCC_DBOX_1
0.0556
Drug responses associated with LMNB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARMRLESLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q03252
Lamin-B2
DEG_APCC_DBOX_1
310:318
ARMRLESLS
APC,CDC20,FZR1
0.758
More...