DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARNSLYDMA
Uniprot ID:
Q9BWF3
Source protein:
RNA-binding protein 4
Source gene:
RBM4
Class:
DEG_APCC_DBOX_1
Location:
340:348
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5544
ASA_SCORE:
89.3889
COIL:
0.526
CONS_SCORE:
0.3756
DSS_SCORE:
0.3214
HELIX:
0.4604
FCONS_SCORE:
0.8659
RIG_SCORE:
0.7879
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R349Q
DO8119
COAD
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.3056
p.E330A
DO233179
GACA
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.0556
p.R341Q
DO233766
GACA
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.7329
p.R341Q
SIDM01090
Colorectal Carcinoma
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.7329
p.R341Q
RKO
large_intestine
COSMIC
ARNSLYDMA
DEG_APCC_DBOX_1
0.7329
p.A340V
DO13522
GBM
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.5825
p.A340V
DO23448
LINC
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.5825
p.L333F
DO228948
LICA
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.1389
p.A336S
DO229026
LICA
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.2222
p.R341L
DO229037
LICA
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.8428
p.R358L
DO37420
SKCM
ICGC
ARNSLYDMA
DEG_APCC_DBOX_1
0.0556
p.E330D
SIDM00845
Burkitt's Lymphoma
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.0556
p.E330D
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
ARNSLYDMA
DEG_APCC_DBOX_1
0.0556
p.A338T
SIDM01245
T-Lymphoblastic Leukemia
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.2778
p.A338T
SIDM00991
T-Lymphoblastic Leukemia
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.2778
p.A338T
BE-13
haematopoietic_and_lymphoid_tissue
COSMIC
ARNSLYDMA
DEG_APCC_DBOX_1
0.2778
p.E330K
SIDM00754
Non-Small Cell Lung Carcinoma
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.0556
p.E330K
NCI-H1781
lung
COSMIC
ARNSLYDMA
DEG_APCC_DBOX_1
0.0556
p.E332K
SIDM00325
Esophageal Squamous Cell Carcinoma
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.1111
p.E332K
ACH-000694
Esophageal Cancer
CCLE
ARNSLYDMA
DEG_APCC_DBOX_1
0.1111
p.E332K
TE-9
oesophagus
COSMIC
ARNSLYDMA
DEG_APCC_DBOX_1
0.1111
p.A338V
SIDM01617
Endometrial Carcinoma
GDSC
ARNSLYDMA
DEG_APCC_DBOX_1
0.2778
Drug responses associated with RBM4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARNSLYDMA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BWF3
RNA-binding protein 4
DEG_APCC_DBOX_1
340:348
ARNSLYDMA
APC,CDC20,FZR1
0.5544
More...