DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ARPFLKDLH
Uniprot ID:
Q9Y4B5
Source protein:
Microtubule cross-linking factor 1
Source gene:
MTCL1
Class:
DEG_APCC_DBOX_1
Location:
45:53
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9223
ASA_SCORE:
95.1444
COIL:
0.7327
CONS_SCORE:
0.3858
DSS_SCORE:
0.6776
HELIX:
0.2441
FCONS_SCORE:
1.0225
RIG_SCORE:
0.6699
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q63R
SIDM00789
Colorectal Carcinoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.0556
p.Q63R
HCT-15
large_intestine
COSMIC
ARPFLKDLH
DEG_APCC_DBOX_1
0.0556
p.A48T
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.7139
p.A48T
HARA
lung
COSMIC
ARPFLKDLH
DEG_APCC_DBOX_1
0.7139
p.S44R
SIDM00240
Cervical Carcinoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.3056
p.S44R
OMC-1
cervix
COSMIC
ARPFLKDLH
DEG_APCC_DBOX_1
0.3056
p.R59Q
SIDM01228
Melanoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.1667
p.R59Q
SIDM00415
B-Cell Non-Hodgkin's Lymphoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.1667
p.R59Q
SIDM01611
Endometrial Carcinoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.1667
p.R59Q
SIDM01760
Rhabdomyosarcoma
GDSC
ARPFLKDLH
DEG_APCC_DBOX_1
0.1667
p.V53G
WM-115
skin
COSMIC
ARPFLKDLH
DEG_APCC_DBOX_1
0.7532
p.R48W
22RV1
prostate
COSMIC
ARPFLKDLH
DEG_APCC_DBOX_1
0.8634
Drug responses associated with MTCL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARPFLKDLH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4B5
Microtubule cross-linking factor 1
DEG_APCC_DBOX_1
45:53
ARPFLKDLH
APC,CDC20,FZR1
0.9223
More...