DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARPSLESLL
Uniprot ID:
O15417
Source protein:
Trinucleotide repeat-containing gene 18 protein
Source gene:
TNRC18
Class:
DEG_APCC_DBOX_1
Location:
1414:1422
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6014
ASA_SCORE:
65.2778
COIL:
0.5103
CONS_SCORE:
0.3813
DSS_SCORE:
0.2554
HELIX:
0.4604
FCONS_SCORE:
1.189
RIG_SCORE:
0.7456
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1404D
TCGA-EK-A2PG
CESC
TCGA
ARPSLESLL
DEG_APCC_DBOX_1
0.0556
p.E1404D
DO49939
CESC
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.0556
p.E1404D
SIDM00834
Colorectal Carcinoma
GDSC
ARPSLESLL
DEG_APCC_DBOX_1
0.0556
p.R1410Q
TCGA-FI-A2D5
UCEC
TCGA
ARPSLESLL
DEG_APCC_DBOX_1
0.2222
p.R1410Q
DO41331
UCEC
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.2222
p.A1411S
DO222404
BTCA
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.25
p.R1415W
DO233136
GACA
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.8634
p.A1423E
DO229036
LICA
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.3056
p.G1425S
DO222837
MELA
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.25
p.A1414P
DO31729
OV
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.6392
p.G1425V
DO229229
THCA
ICGC
ARPSLESLL
DEG_APCC_DBOX_1
0.25
p.G1425V
ACH-000871
Lung Cancer
CCLE
ARPSLESLL
DEG_APCC_DBOX_1
0.25
p.A1408V
SIDM00429
B-Lymphoblastic Leukemia
GDSC
ARPSLESLL
DEG_APCC_DBOX_1
0.1667
p.E1409K
ACH-000481
Lung Cancer
CCLE
ARPSLESLL
DEG_APCC_DBOX_1
0.1944
p.A1414V
ACH-002800
Unknown
CCLE
ARPSLESLL
DEG_APCC_DBOX_1
0.5825
Drug responses associated with TNRC18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARPSLESLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15417
Trinucleotide repeat-containing gene 18 protein
DEG_APCC_DBOX_1
1414:1422
ARPSLESLL
APC,CDC20,FZR1
0.6014
More...