DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARPSLSTVH
Uniprot ID:
Q8IYX3
Source protein:
Coiled-coil domain-containing protein 116
Source gene:
CCDC116
Class:
DEG_APCC_DBOX_1
Location:
126:134
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6548
ASA_SCORE:
82.9333
COIL:
0.694
CONS_SCORE:
0.8561
DSS_SCORE:
0.6327
HELIX:
0.0609
FCONS_SCORE:
1.041
RIG_SCORE:
0.6391
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R127W
TCGA-D3-A3ML
SKCM
TCGA
ARPSLSTVH
DEG_APCC_DBOX_1
0.8634
p.R127W
TCGA-YD-A9TA
SKCM
TCGA
ARPSLSTVH
DEG_APCC_DBOX_1
0.8634
p.R127W
DO47413
SKCM
ICGC
ARPSLSTVH
DEG_APCC_DBOX_1
0.8634
p.R127W
DO219503
SKCM
ICGC
ARPSLSTVH
DEG_APCC_DBOX_1
0.8634
p.S131I
SIDM01169
Ovarian Carcinoma
GDSC
ARPSLSTVH
DEG_APCC_DBOX_1
0.623
p.S131I
ACH-000885
Ovarian Cancer
CCLE
ARPSLSTVH
DEG_APCC_DBOX_1
0.623
p.S131I
TOV-21G
ovary
COSMIC
ARPSLSTVH
DEG_APCC_DBOX_1
0.623
p.S131T
TCGA-EE-A2MC
SKCM
TCGA
ARPSLSTVH
DEG_APCC_DBOX_1
0.6005
p.S131T
DO37559
SKCM
ICGC
ARPSLSTVH
DEG_APCC_DBOX_1
0.6005
p.V133I
SIDM01113
Other Sarcomas
GDSC
ARPSLSTVH
DEG_APCC_DBOX_1
0.5965
p.V133I
ACH-000939
Sarcoma
CCLE
ARPSLSTVH
DEG_APCC_DBOX_1
0.5965
p.V133I
SK-UT-1
soft_tissue
COSMIC
ARPSLSTVH
DEG_APCC_DBOX_1
0.5965
p.R123Q
TCGA-DX-AB32
SARC
TCGA
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R123Q
DO220102
SARC
ICGC
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R137S
TCGA-EO-A3B0
UCEC
TCGA
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R137S
DO219773
UCEC
ICGC
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R137H
SIDM02047
Colorectal Carcinoma
GDSC
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R123W
SIDM00958
Chronic Myelogenous Leukemia
GDSC
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R123W
ACH-000920
Leukemia
CCLE
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R123W
ACH-001991
Primary
CCLE
ARPSLSTVH
DEG_APCC_DBOX_1
0.25
p.R139W
TCGA-AA-3521
COAD
TCGA
ARPSLSTVH
DEG_APCC_DBOX_1
0.1944
p.R139W
DO8079
COAD
ICGC
ARPSLSTVH
DEG_APCC_DBOX_1
0.1944
p.R139W
SIDM00253
Neuroblastoma
GDSC
ARPSLSTVH
DEG_APCC_DBOX_1
0.1944
p.R139W
ACH-002284
Neuroblastoma
CCLE
ARPSLSTVH
DEG_APCC_DBOX_1
0.1944
p.R139W
NB6
autonomic_ganglia
COSMIC
ARPSLSTVH
DEG_APCC_DBOX_1
0.1944
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Drug responses associated with CCDC116 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of ARPSLSTVH
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYX3
Coiled-coil domain-containing protein 116
DEG_APCC_DBOX_1
126:134
ARPSLSTVH
APC,CDC20,FZR1
0.6548
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