DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARQPLGSLG
Uniprot ID:
P0CG21
Source protein:
NHL-repeat-containing protein 4
Source gene:
NHLRC4
Class:
DEG_APCC_DBOX_1
Location:
33:41
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5937
ASA_SCORE:
50.9
COIL:
0.4689
CONS_SCORE:
0.6048
DSS_SCORE:
0.2844
HELIX:
0.0047
FCONS_SCORE:
0.8762
RIG_SCORE:
0.7111
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T44A
TCGA-B5-A3FC
UCEC
TCGA
ARQPLGSLG
DEG_APCC_DBOX_1
0.25
p.T44A
DO41871
UCEC
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.25
p.D26N
TCGA-CV-7263
HNSC
TCGA
ARQPLGSLG
DEG_APCC_DBOX_1
0.1389
p.D26N
DO14398
HNSC
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.1389
p.S32N
TCGA-G4-6628
COAD
TCGA
ARQPLGSLG
DEG_APCC_DBOX_1
0.3056
p.S32N
DO10132
COAD
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.3056
p.S39F
TCGA-GC-A6I3
BLCA
TCGA
ARQPLGSLG
DEG_APCC_DBOX_1
0.6871
p.S39F
DO219025
BLCA
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.6871
p.L40P
TCGA-UB-A7MB
LIHC
TCGA
ARQPLGSLG
DEG_APCC_DBOX_1
0.7582
p.L40P
DO52318
LIHC
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.7582
p.F24I
TCGA-ZF-AA4W
BLCA
TCGA
ARQPLGSLG
DEG_APCC_DBOX_1
0.0833
p.F24I
DO219089
BLCA
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.0833
p.D26E
DO225130
BRCA
ICGC
ARQPLGSLG
DEG_APCC_DBOX_1
0.1389
p.S39C
SIDM00796
Head and Neck Carcinoma
GDSC
ARQPLGSLG
DEG_APCC_DBOX_1
0.643
p.S39C
ACH-000740
Head and Neck Cancer
CCLE
ARQPLGSLG
DEG_APCC_DBOX_1
0.643
p.S39C
A253
salivary_gland
COSMIC
ARQPLGSLG
DEG_APCC_DBOX_1
0.643
Drug responses associated with NHLRC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARQPLGSLG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P0CG21
NHL-repeat-containing protein 4
DEG_APCC_DBOX_1
33:41
ARQPLGSLG
APC,CDC20,FZR1
0.5937
More...