DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARRLLRLVV
Uniprot ID:
O60500
Source protein:
Nephrin
Source gene:
NPHS1
Class:
DEG_APCC_DBOX_1
Location:
826:834
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6594
ASA_SCORE:
56.8444
COIL:
0.1162
CONS_SCORE:
0.4405
DSS_SCORE:
0.1962
HELIX:
0.0059
FCONS_SCORE:
0.8641
RIG_SCORE:
0.883
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R831G
TCGA-90-7769
LUSC
TCGA
ARRLLRLVV
DEG_APCC_DBOX_1
0.6457
p.R831G
DO26822
LUSC
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.6457
p.A823V
TCGA-AA-A01R
COAD
TCGA
ARRLLRLVV
DEG_APCC_DBOX_1
0.25
p.A823V
DO7934
COAD
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.25
p.A823V
DO233044
GACA
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.25
p.Q839K
TCGA-BF-A1Q0
SKCM
TCGA
ARRLLRLVV
DEG_APCC_DBOX_1
0.1944
p.Q839K
DO47374
SKCM
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.1944
p.R827Q
TCGA-EE-A29D
SKCM
TCGA
ARRLLRLVV
DEG_APCC_DBOX_1
0.7329
p.R827Q
DO38123
SKCM
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.7329
p.V818A
TCGA-MA-AA42
CESC
TCGA
ARRLLRLVV
DEG_APCC_DBOX_1
0.1111
p.V818A
DO219724
CESC
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.1111
p.L830I
DO229009
LICA
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.7174
p.I817N
DO222420
MELA
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.0833
p.P824H
DO228640
PRAD
ICGC
ARRLLRLVV
DEG_APCC_DBOX_1
0.2778
Drug responses associated with NPHS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARRLLRLVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60500
Nephrin
DEG_APCC_DBOX_1
826:834
ARRLLRLVV
APC,CDC20,FZR1
0.6594
More...