DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
CKENR
Uniprot ID:
Q9HBJ7
Source protein:
Ubiquitin carboxyl-terminal hydrolase 29
Source gene:
USP29
Class:
DEG_APCC_KENBOX_2
Location:
718:722
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9686
ASA_SCORE:
97
COIL:
0.732
CONS_SCORE:
0.3348
DSS_SCORE:
0.4897
HELIX:
0.1502
FCONS_SCORE:
1.0025
RIG_SCORE:
0.8115
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T712A
TCGA-53-7624
LUAD
TCGA
CKENR
DEG_APCC_KENBOX_2
0.1667
p.T712A
DO25058
LUAD
ICGC
CKENR
DEG_APCC_KENBOX_2
0.1667
p.G726E
TCGA-D3-A51T
SKCM
TCGA
CKENR
DEG_APCC_KENBOX_2
0.2222
p.G726E
DO47389
SKCM
ICGC
CKENR
DEG_APCC_KENBOX_2
0.2222
p.G726E
SIDM00586
Hepatocellular Carcinoma
GDSC
CKENR
DEG_APCC_KENBOX_2
0.2222
p.G726E
ACH-000475
Liver Cancer
CCLE
CKENR
DEG_APCC_KENBOX_2
0.2222
p.G726E
huH-1
liver
COSMIC
CKENR
DEG_APCC_KENBOX_2
0.2222
p.S727F
TCGA-EO-A22X
UCEC
TCGA
CKENR
DEG_APCC_KENBOX_2
0.1944
p.S727F
DO43907
UCEC
ICGC
CKENR
DEG_APCC_KENBOX_2
0.1944
p.R722M
TCGA-FS-A1ZG
SKCM
TCGA
CKENR
DEG_APCC_KENBOX_2
0.7521
p.R722M
DO37523
SKCM
ICGC
CKENR
DEG_APCC_KENBOX_2
0.7521
p.P724T
TCGA-KQ-A41N
BLCA
TCGA
CKENR
DEG_APCC_KENBOX_2
0.2778
p.P724T
DO223588
BLCA
ICGC
CKENR
DEG_APCC_KENBOX_2
0.2778
p.M730I
DO229032
LICA
ICGC
CKENR
DEG_APCC_KENBOX_2
0.1111
p.R722K
DO222572
MELA
ICGC
CKENR
DEG_APCC_KENBOX_2
0.6126
p.T712P
SIDM01314
Colorectal Carcinoma
GDSC
CKENR
DEG_APCC_KENBOX_2
0.1667
p.E720K
SIDM01511
Gastric Carcinoma
GDSC
CKENR
DEG_APCC_KENBOX_2
0.7022
p.E720K
ACH-000746
Gastric Cancer
CCLE
CKENR
DEG_APCC_KENBOX_2
0.7022
p.C718R
RPMI-2650
upper_aerodigestive_tract
COSMIC
CKENR
DEG_APCC_KENBOX_2
0.719
Drug responses associated with USP29 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of CKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HBJ7
Ubiquitin carboxyl-terminal hydrolase 29
DEG_APCC_KENBOX_2
718:722
CKENR
APC,CDC20,FZR1
0.9686
More...