DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
CRHSLAIMP
Uniprot ID:
Q8TEU7
Source protein:
Rap guanine nucleotide exchange factor 6
Source gene:
RAPGEF6
Class:
DEG_APCC_DBOX_1
Location:
712:720
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9785
ASA_SCORE:
77.1889
COIL:
0.7159
CONS_SCORE:
0.3377
DSS_SCORE:
0.4321
HELIX:
0.1421
FCONS_SCORE:
0.8592
RIG_SCORE:
0.7619
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S705I
TCGA-78-7220
LUAD
TCGA
CRHSLAIMP
DEG_APCC_DBOX_1
0.5833
p.S705I
DO24409
LUAD
ICGC
CRHSLAIMP
DEG_APCC_DBOX_1
0.5833
p.H711N
DO229031
LICA
ICGC
CRHSLAIMP
DEG_APCC_DBOX_1
0.3056
p.T709K
DO229008
LICA
ICGC
CRHSLAIMP
DEG_APCC_DBOX_1
0.25
p.R713K
SIDM00649
Non-Small Cell Lung Carcinoma
GDSC
CRHSLAIMP
DEG_APCC_DBOX_1
0.7237
p.R713K
NCI-H1299
lung
COSMIC
CRHSLAIMP
DEG_APCC_DBOX_1
0.7237
p.H714Y
SIDM00602
Gastric Carcinoma
GDSC
CRHSLAIMP
DEG_APCC_DBOX_1
0.6118
p.H714Y
ACH-000919
Gastric Cancer
CCLE
CRHSLAIMP
DEG_APCC_DBOX_1
0.6118
p.H714Y
IM-95
stomach
COSMIC
CRHSLAIMP
DEG_APCC_DBOX_1
0.6118
p.A717T
SIDM00007
Other Solid Cancers
GDSC
CRHSLAIMP
DEG_APCC_DBOX_1
0.6028
p.A717T
ACH-001550
Skin Cancer
CCLE
CRHSLAIMP
DEG_APCC_DBOX_1
0.6028
p.A717T
MCC13
skin
COSMIC
CRHSLAIMP
DEG_APCC_DBOX_1
0.6028
p.V707L
SIDM01066
Melanoma
GDSC
CRHSLAIMP
DEG_APCC_DBOX_1
0.1944
p.V707L
ACH-000650
Skin Cancer
CCLE
CRHSLAIMP
DEG_APCC_DBOX_1
0.1944
p.V707L
IGR-37
skin
COSMIC
CRHSLAIMP
DEG_APCC_DBOX_1
0.1944
Drug responses associated with RAPGEF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of CRHSLAIMP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEU7
Rap guanine nucleotide exchange factor 6
DEG_APCC_DBOX_1
712:720
CRHSLAIMP
APC,CDC20,FZR1
0.9785
More...