DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
CRQSLSHML
Uniprot ID:
P53618
Source protein:
Coatomer subunit beta
Source gene:
COPB1
Class:
DEG_APCC_DBOX_1
Location:
635:643
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6948
ASA_SCORE:
56.8111
COIL:
0.1429
CONS_SCORE:
0.3816
DSS_SCORE:
0.2955
HELIX:
0.8539
FCONS_SCORE:
1.1277
RIG_SCORE:
0.7627
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D629N
TCGA-18-3415
LUSC
TCGA
CRQSLSHML
DEG_APCC_DBOX_1
0.1667
p.D629N
DO26427
LUSC
ICGC
CRQSLSHML
DEG_APCC_DBOX_1
0.1667
p.E648K
TCGA-AG-4015
READ
TCGA
CRQSLSHML
DEG_APCC_DBOX_1
0.1944
p.E648K
DO36459
READ
ICGC
CRQSLSHML
DEG_APCC_DBOX_1
0.1944
p.K651N
TCGA-AX-A2HC
UCEC
TCGA
CRQSLSHML
DEG_APCC_DBOX_1
0.5556
p.K651N
DO41572
UCEC
ICGC
CRQSLSHML
DEG_APCC_DBOX_1
0.5556
p.L652V
DO222798
COCA
ICGC
CRQSLSHML
DEG_APCC_DBOX_1
0.0833
p.D629E
DO229045
LICA
ICGC
CRQSLSHML
DEG_APCC_DBOX_1
0.1667
Drug responses associated with COPB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of CRQSLSHML
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P53618
Coatomer subunit beta
DEG_APCC_DBOX_1
635:643
CRQSLSHML
APC,CDC20,FZR1
0.6948
More...