DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DEAVTLRVPDM
Uniprot ID:
Q24JP5
Source protein:
Transmembrane protein 132A
Source gene:
TMEM132A
Class:
DEG_COP1_1
Location:
253:263
E3 ligase:
COP1
DEGRON score:
0.8793
ASA_SCORE:
51
COIL:
0.5947
CONS_SCORE:
0.8006
DSS_SCORE:
0.4031
HELIX:
0.0297
FCONS_SCORE:
1.0008
RIG_SCORE:
0.8027
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D243Y
TCGA-55-8207
LUAD
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.0556
p.D243Y
DO45351
LUAD
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.0556
p.R266W
TCGA-A6-5661
COAD
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266W
DO8634
COAD
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266L
TCGA-AA-3715
COAD
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266L
DO8018
COAD
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266Q
TCGA-AZ-4315
COAD
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266Q
TCGA-GF-A3OT
SKCM
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266Q
DO8842
COAD
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.25
p.R266Q
DO47288
SKCM
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.25
p.P251L
TCGA-FW-A3R5
SKCM
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.2778
p.P251L
TCGA-GN-A8LK
SKCM
TCGA
DEAVTLRVPDM
DEG_COP1_1
0.2778
p.P251L
DO37406
SKCM
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.2778
p.P251L
DO51259
SKCM
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.2778
p.A273G
DO228301
LICA
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.0556
p.P264S
DO23543
LIRI
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.3056
p.D253N
DO222837
MELA
ICGC
DEAVTLRVPDM
DEG_COP1_1
0.6932
p.E249K
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
DEAVTLRVPDM
DEG_COP1_1
0.2222
p.E249K
ACH-000823
Esophageal Cancer
CCLE
DEAVTLRVPDM
DEG_COP1_1
0.2222
p.E249K
KYSE-140
oesophagus
COSMIC
DEAVTLRVPDM
DEG_COP1_1
0.2222
p.G268S
ACH-000451
Lung Cancer
CCLE
DEAVTLRVPDM
DEG_COP1_1
0.1944
Drug responses associated with TMEM132A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DEAVTLRVPDM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q24JP5
Transmembrane protein 132A
DEG_COP1_1
253:263
DEAVTLRVPDM
COP1
0.8793
More...