DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DEDSGE
Uniprot ID:
Q8TBB5
Source protein:
Kelch domain-containing protein 4
Source gene:
KLHDC4
Class:
DEG_Kelch_Keap1_1
Location:
509:514
E3 ligase:
KEAP1
DEGRON score:
0.8231
ASA_SCORE:
97.6667
COIL:
0.929
CONS_SCORE:
0.346
DSS_SCORE:
0.9896
HELIX:
0.0492
FCONS_SCORE:
0.8625
RIG_SCORE:
0.5971
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E504A
TCGA-AP-A054
UCEC
TCGA
DEDSGE
DEG_Kelch_Keap1_1
0.1944
p.G513R
TCGA-AR-A0U4
BRCA
TCGA
DEDSGE
DEG_Kelch_Keap1_1
0.7568
p.A518V
TCGA-BT-A3PH
BLCA
TCGA
DEDSGE
DEG_Kelch_Keap1_1
0.2222
p.G506V
TCGA-D3-A2J6
SKCM
TCGA
DEDSGE
DEG_Kelch_Keap1_1
0.25
p.E510K
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.591
p.E510D
SIDM01030
Esophageal Squamous Cell Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
SIDM00544
Neuroblastoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
SIDM00276
Biliary Tract Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
SIDM00241
Breast Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
SIDM00579
Neuroblastoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
KYSE-180
oesophagus
COSMIC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
GOTO
autonomic_ganglia
COSMIC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
OCUB-M
breast
COSMIC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.E510D
ETK-1
biliary_tract
COSMIC
DEDSGE
DEG_Kelch_Keap1_1
0.5647
p.D508N
SIDM00676
Bladder Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.3056
p.G506R
SIDM01114
Non-Cancerous
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.25
p.G506R
SIDM00734
Non-Small Cell Lung Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.25
p.G506R
SIDM01680
Non-Cancerous
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.25
p.G506R
SIDM01083
Oral Cavity Carcinoma
GDSC
DEDSGE
DEG_Kelch_Keap1_1
0.25
Drug responses associated with KLHDC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DEDSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TBB5
Kelch domain-containing protein 4
DEG_Kelch_Keap1_1
509:514
DEDSGE
KEAP1
0.8231
More...