DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DEEDGDEVPVPSF
Uniprot ID:
P07199
Source protein:
Major centromere autoantigen B
Source gene:
CENPB
Class:
DEG_COP1_1
Location:
532:544
E3 ligase:
COP1
DEGRON score:
0.9042
ASA_SCORE:
83.8308
COIL:
0.8491
CONS_SCORE:
0.356
DSS_SCORE:
0.8495
HELIX:
0.1168
FCONS_SCORE:
1.1224
RIG_SCORE:
0.6757
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D529N
TCGA-A5-A0G2
UCEC
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.25
p.D529N
TCGA-AG-3902
READ
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.25
p.D529N
TCGA-EO-A22R
UCEC
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.25
p.D529N
DO36407
READ
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.25
p.D529N
DO41235
UCEC
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.25
p.D529N
DO42713
UCEC
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.25
p.A549T
TCGA-A5-A2K7
UCEC
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.1944
p.A549T
DO41271
UCEC
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.1944
p.A549T
SIDM00145
T-Lymphoblastic Leukemia
GDSC
DEEDGDEVPVPSF
DEG_COP1_1
0.1944
p.A549T
ACH-001127
Leukemia
CCLE
DEEDGDEVPVPSF
DEG_COP1_1
0.1944
p.A549T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
DEEDGDEVPVPSF
DEG_COP1_1
0.1944
p.G545V
TCGA-D3-A1QA
SKCM
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.3056
p.G545V
DO47469
SKCM
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.3056
p.D530N
TCGA-FI-A2D5
UCEC
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.2778
p.D530N
DO41331
UCEC
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.2778
p.D524E
TCGA-GN-A8LL
SKCM
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.1111
p.D524E
DO51261
SKCM
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.1111
p.E538Q
TCGA-VS-A953
CESC
TCGA
DEEDGDEVPVPSF
DEG_COP1_1
0.5633
p.E538Q
DO219727
CESC
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.5633
p.E533V
DO231992
LICA
ICGC
DEEDGDEVPVPSF
DEG_COP1_1
0.7693
p.E533D
SIDM00845
Burkitt's Lymphoma
GDSC
DEEDGDEVPVPSF
DEG_COP1_1
0.5647
Drug responses associated with CENPB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DEEDGDEVPVPSF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07199
Major centromere autoantigen B
DEG_COP1_1
532:544
DEEDGDEVPVPSF
COP1
0.9042
More...