DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DELVVPSP
Uniprot ID:
Q5T5X7
Source protein:
BEN domain-containing protein 3
Source gene:
BEND3
Class:
DEG_COP1_1
Location:
704:711
E3 ligase:
COP1
DEGRON score:
0.9124
ASA_SCORE:
80.55
COIL:
0.7975
CONS_SCORE:
0.8827
DSS_SCORE:
0.3436
HELIX:
0.1599
FCONS_SCORE:
0.9295
RIG_SCORE:
0.7485
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D704Y
TCGA-66-2793
LUSC
TCGA
DELVVPSP
DEG_COP1_1
0.7325
p.D704Y
DO27334
LUSC
ICGC
DELVVPSP
DEG_COP1_1
0.7325
p.P714L
TCGA-CA-5256
COAD
TCGA
DELVVPSP
DEG_COP1_1
0.25
p.P714L
DO10526
COAD
ICGC
DELVVPSP
DEG_COP1_1
0.25
p.P702L
TCGA-D6-6516
HNSC
TCGA
DELVVPSP
DEG_COP1_1
0.2778
p.P702L
DO15623
HNSC
ICGC
DELVVPSP
DEG_COP1_1
0.2778
p.P718S
TCGA-YD-A9TA
SKCM
TCGA
DELVVPSP
DEG_COP1_1
0.1389
p.P718S
DO219503
SKCM
ICGC
DELVVPSP
DEG_COP1_1
0.1389
p.P714S
DO229456
SKCA
ICGC
DELVVPSP
DEG_COP1_1
0.25
p.D712G
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
DELVVPSP
DEG_COP1_1
0.3056
p.D712G
ACH-002272
Lymphoma
CCLE
DELVVPSP
DEG_COP1_1
0.3056
p.D712G
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
DELVVPSP
DEG_COP1_1
0.3056
p.D704V
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
DELVVPSP
DEG_COP1_1
0.7785
p.D704V
ACH-002101
Lung Cancer
CCLE
DELVVPSP
DEG_COP1_1
0.7785
p.D704V
EMC-BAC-1
lung
COSMIC
DELVVPSP
DEG_COP1_1
0.7785
p.D697N
ACH-001521
Skin Cancer
CCLE
DELVVPSP
DEG_COP1_1
0.1389
Drug responses associated with BEND3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DELVVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5X7
BEN domain-containing protein 3
DEG_COP1_1
704:711
DELVVPSP
COP1
0.9124
More...