DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DESDSDLSDVPEL
Uniprot ID:
Q05BV3
Source protein:
Echinoderm microtubule-associated protein-like 5
Source gene:
EML5
Class:
DEG_COP1_1
Location:
617:629
E3 ligase:
COP1
DEGRON score:
0.9196
ASA_SCORE:
72.4615
COIL:
0.7915
CONS_SCORE:
0.5902
DSS_SCORE:
0.702
HELIX:
0.1481
FCONS_SCORE:
1.0892
RIG_SCORE:
0.6279
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D617Y
ACH-001853
Bile Duct Cancer
CCLE
DESDSDLSDVPEL
DEG_COP1_1
0.7325
p.E628Q
DO48246
ESCA
ICGC
DESDSDLSDVPEL
DEG_COP1_1
0.6744
p.D625V
DO222637
BTCA
ICGC
DESDSDLSDVPEL
DEG_COP1_1
0.6674
p.D625N
TCGA-W3-AA1V
SKCM
TCGA
DESDSDLSDVPEL
DEG_COP1_1
0.5821
p.D625N
DO51276
SKCM
ICGC
DESDSDLSDVPEL
DEG_COP1_1
0.5821
p.S616N
DO229177
LMS
ICGC
DESDSDLSDVPEL
DEG_COP1_1
0.3056
p.I633V
SIDM00961
Ewing's Sarcoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00352
Ovarian Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01242
Melanoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00358
Gastric Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00585
Hepatocellular Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00251
Gastric Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00242
Osteosarcoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00271
Gastric Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00363
Acute Myeloid Leukemia
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM00531
Pancreatic Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01439
Hepatocellular Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01659
Kidney Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01377
Ovarian Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01776
Plasma Cell Myeloma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01454
Kidney Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01782
Oral Cavity Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
SIDM01574
Plasma Cell Myeloma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.I633V
CADO-ES1
bone
COSMIC
DESDSDLSDVPEL
DEG_COP1_1
0.2222
p.E634Q
SIDM00751
Non-Small Cell Lung Carcinoma
GDSC
DESDSDLSDVPEL
DEG_COP1_1
0.1944
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Drug responses associated with EML5 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DESDSDLSDVPEL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q05BV3
Echinoderm microtubule-associated protein-like 5
DEG_COP1_1
617:629
DESDSDLSDVPEL
COP1
0.9196
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