DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DFLSPFSVPEA
Uniprot ID:
Q8NFF2
Source protein:
Sodium/potassium/calcium exchanger 4
Source gene:
SLC24A4
Class:
DEG_COP1_1
Location:
410:420
E3 ligase:
COP1
DEGRON score:
0.9275
ASA_SCORE:
63.5455
COIL:
0.7775
CONS_SCORE:
0.2999
DSS_SCORE:
0.4681
HELIX:
0.1815
FCONS_SCORE:
0.9912
RIG_SCORE:
0.7309
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V417M
TCGA-51-4081
LUSC
TCGA
DFLSPFSVPEA
DEG_COP1_1
0.7208
p.V407M
TCGA-AX-A1C4
UCEC
TCGA
DFLSPFSVPEA
DEG_COP1_1
0.25
p.V428A
TCGA-B5-A3FC
UCEC
TCGA
DFLSPFSVPEA
DEG_COP1_1
0.1111
p.E405V
TCGA-BR-8591
STAD
TCGA
DFLSPFSVPEA
DEG_COP1_1
0.1944
p.R421T
TCGA-UY-A9PD
BLCA
TCGA
DFLSPFSVPEA
DEG_COP1_1
0.3056
p.G415R
DO9226
COAD
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.7568
p.G415R
DO13462
GBM
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.7568
p.P421L
DO234336
ESAD
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.3056
p.V408E
DO48204
ESCA
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.2778
p.P421Q
DO14766
HNSC
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.3056
p.P421Q
DO47573
SKCM
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.3056
p.M425I
DO229026
LICA
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.1944
p.V411M
DO26790
LUSC
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.7208
p.V411M
DO222708
MELA
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.7208
p.G419V
DO37571
SKCM
ICGC
DFLSPFSVPEA
DEG_COP1_1
0.7532
p.P402S
SIDM00498
Colorectal Carcinoma
GDSC
DFLSPFSVPEA
DEG_COP1_1
0.1111
p.P402S
SNU-C5
large_intestine
COSMIC
DFLSPFSVPEA
DEG_COP1_1
0.1111
p.G419A
NCI-H345
lung
COSMIC
DFLSPFSVPEA
DEG_COP1_1
0.754
Drug responses associated with SLC24A4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DFLSPFSVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFF2
Sodium/potassium/calcium exchanger 4
DEG_COP1_1
410:420
DFLSPFSVPEA
COP1
0.9275
More...