DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DKENM
Uniprot ID:
Q8WWK9
Source protein:
Cytoskeleton-associated protein 2
Source gene:
CKAP2
Class:
DEG_APCC_KENBOX_2
Location:
80:84
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9983
ASA_SCORE:
99.02
COIL:
0.5038
CONS_SCORE:
0.3835
DSS_SCORE:
0.6045
HELIX:
0.4654
FCONS_SCORE:
1.2006
RIG_SCORE:
0.7264
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M78I
TCGA-EE-A2MD
SKCM
TCGA
DKENM
DEG_APCC_KENBOX_2
0.2778
p.K70T
TCGA-EO-A22X
UCEC
TCGA
DKENM
DEG_APCC_KENBOX_2
0.5
p.V71A
TCGA-GF-A6C8
SKCM
TCGA
DKENM
DEG_APCC_KENBOX_2
0.0833
p.P79L
DO3500
BRCA
ICGC
DKENM
DEG_APCC_KENBOX_2
0.3056
p.N76I
DO8463
COAD
ICGC
DKENM
DEG_APCC_KENBOX_2
0.2222
p.S75R
DO41584
UCEC
ICGC
DKENM
DEG_APCC_KENBOX_2
0.3056
p.S90N
SIDM01090
Colorectal Carcinoma
GDSC
DKENM
DEG_APCC_KENBOX_2
0.1667
p.S90N
ACH-000943
Colon/Colorectal Cancer
CCLE
DKENM
DEG_APCC_KENBOX_2
0.1667
p.S90N
RKO
large_intestine
COSMIC
DKENM
DEG_APCC_KENBOX_2
0.1667
p.L74R
SIDM01060
Melanoma
GDSC
DKENM
DEG_APCC_KENBOX_2
0.1667
p.L74R
ACH-000882
Skin Cancer
CCLE
DKENM
DEG_APCC_KENBOX_2
0.1667
p.L74R
IGR-1
skin
COSMIC
DKENM
DEG_APCC_KENBOX_2
0.1667
p.L73R
IGR-1
skin
COSMIC
DKENM
DEG_APCC_KENBOX_2
0.5833
p.S89N
RKO
large_intestine
COSMIC
DKENM
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with CKAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWK9
Cytoskeleton-associated protein 2
DEG_APCC_KENBOX_2
80:84
DKENM
APC,CDC20,FZR1
0.9983
More...