DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DLDRETVPEY
Uniprot ID:
Q9UN70
Source protein:
Protocadherin gamma-C3
Source gene:
PCDHGC3
Class:
DEG_COP1_1
Location:
414:423
E3 ligase:
COP1
DEGRON score:
0.6696
ASA_SCORE:
73.9
COIL:
0.8095
CONS_SCORE:
0.6037
DSS_SCORE:
0.3092
HELIX:
0.065
FCONS_SCORE:
1.0953
RIG_SCORE:
0.8156
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T411A
TCGA-AJ-A3EL
UCEC
TCGA
DLDRETVPEY
DEG_COP1_1
0.25
p.T411A
DO41542
UCEC
ICGC
DLDRETVPEY
DEG_COP1_1
0.25
p.K404N
TCGA-D1-A16Y
UCEC
TCGA
DLDRETVPEY
DEG_COP1_1
0.1667
p.K404N
DO41524
UCEC
ICGC
DLDRETVPEY
DEG_COP1_1
0.1667
p.A429T
TCGA-G4-6320
COAD
TCGA
DLDRETVPEY
DEG_COP1_1
0.1667
p.A429T
DO8159
COAD
ICGC
DLDRETVPEY
DEG_COP1_1
0.1667
p.R430Q
DO227996
COCA
ICGC
DLDRETVPEY
DEG_COP1_1
0.1389
p.R430Q
SIDM00111
Glioma
GDSC
DLDRETVPEY
DEG_COP1_1
0.1389
p.R430Q
SIDM00707
Non-Cancerous
GDSC
DLDRETVPEY
DEG_COP1_1
0.1389
p.R430Q
SIDM00905
Cervical Carcinoma
GDSC
DLDRETVPEY
DEG_COP1_1
0.1389
p.R430Q
SIDM00467
Acute Myeloid Leukemia
GDSC
DLDRETVPEY
DEG_COP1_1
0.1389
p.R417L
DO229015
LICA
ICGC
DLDRETVPEY
DEG_COP1_1
0.7316
p.A432S
DO229009
LICA
ICGC
DLDRETVPEY
DEG_COP1_1
0.0833
p.E418D
DO230934
LUSC
ICGC
DLDRETVPEY
DEG_COP1_1
0.5647
p.S412G
SIDM01045
Endometrial Carcinoma
GDSC
DLDRETVPEY
DEG_COP1_1
0.2778
p.S412G
ACH-000978
Endometrial/Uterine Cancer
CCLE
DLDRETVPEY
DEG_COP1_1
0.2778
p.S412G
EN
endometrium
COSMIC
DLDRETVPEY
DEG_COP1_1
0.2778
Drug responses associated with PCDHGC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DLDRETVPEY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UN70
Protocadherin gamma-C3
DEG_COP1_1
414:423
DLDRETVPEY
COP1
0.6696
More...