DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DLEEEPVPDL
Uniprot ID:
Q9P1Y6
Source protein:
PHD and RING finger domain-containing protein 1
Source gene:
PHRF1
Class:
DEG_COP1_1
Location:
496:505
E3 ligase:
COP1
DEGRON score:
0.9777
ASA_SCORE:
98.15
COIL:
0.9123
CONS_SCORE:
0.4706
DSS_SCORE:
0.4729
HELIX:
0.0425
FCONS_SCORE:
1.1056
RIG_SCORE:
0.7551
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S510W
TCGA-CN-6013
HNSC
TCGA
DLEEEPVPDL
DEG_COP1_1
0.1944
p.L509Q
TCGA-MQ-A4LJ
MESO
TCGA
DLEEEPVPDL
DEG_COP1_1
0.2222
p.G506D
TCGA-SS-A7HO
COAD
TCGA
DLEEEPVPDL
DEG_COP1_1
0.3056
p.G505D
DO223705
COAD
ICGC
DLEEEPVPDL
DEG_COP1_1
0.7198
p.S509W
DO15975
HNSC
ICGC
DLEEEPVPDL
DEG_COP1_1
0.2222
p.L514P
DO229229
THCA
ICGC
DLEEEPVPDL
DEG_COP1_1
0.0833
p.E500K
ACH-000931
Skin Cancer
CCLE
DLEEEPVPDL
DEG_COP1_1
0.591
p.P488S
ACH-002349
Non-Cancerous
CCLE
DLEEEPVPDL
DEG_COP1_1
0.1111
p.M515R
SK-GT-2
stomach
COSMIC
DLEEEPVPDL
DEG_COP1_1
0.0556
p.M513R
SK-GT-2
stomach
COSMIC
DLEEEPVPDL
DEG_COP1_1
0.1111
Drug responses associated with PHRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DLEEEPVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1Y6
PHD and RING finger domain-containing protein 1
DEG_COP1_1
496:505
DLEEEPVPDL
COP1
0.9777
More...