DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DNLDAYSHIP
Uniprot ID:
Q9H3S7
Source protein:
Tyrosine-protein phosphatase non-receptor type 23
Source gene:
PTPN23
Class:
CBL_PTK
Location:
409:418
E3 ligase:
CBL
DEGRON score:
0.7467
ASA_SCORE:
73.55
COIL:
0.6846
CONS_SCORE:
0.2898
DSS_SCORE:
0.4122
HELIX:
0.2998
FCONS_SCORE:
0.6543
RIG_SCORE:
0.7609
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A426T
TCGA-AX-A0J1
UCEC
TCGA
DNLDAYSHIP
CBL_PTK
0.1111
p.S400A
TCGA-B5-A1MR
UCEC
TCGA
DNLDAYSHIP
CBL_PTK
0.0833
p.A413T
TCGA-EE-A2MQ
SKCM
TCGA
DNLDAYSHIP
CBL_PTK
0.6028
p.A413T
DO38711
STAD
ICGC
DNLDAYSHIP
CBL_PTK
0.6028
p.R411W
DO1608
BRCA
ICGC
DNLDAYSHIP
CBL_PTK
0.8634
p.R401C
DO223732
CESC
ICGC
DNLDAYSHIP
CBL_PTK
0.1111
p.R401C
DO41903
UCEC
ICGC
DNLDAYSHIP
CBL_PTK
0.1111
p.R401H
DO8490
COAD
ICGC
DNLDAYSHIP
CBL_PTK
0.1111
p.P417L
DO233270
GACA
ICGC
DNLDAYSHIP
CBL_PTK
0.7582
p.K424N
DO229018
LICA
ICGC
DNLDAYSHIP
CBL_PTK
0.2778
p.R411L
DO37515
SKCM
ICGC
DNLDAYSHIP
CBL_PTK
0.8428
p.Q428P
DO222393
STAD
ICGC
DNLDAYSHIP
CBL_PTK
0.0556
p.A418T
DO229242
THCA
ICGC
DNLDAYSHIP
CBL_PTK
0.7139
p.A418T
DO41572
UCEC
ICGC
DNLDAYSHIP
CBL_PTK
0.7139
p.L421R
SIDM01090
Colorectal Carcinoma
GDSC
DNLDAYSHIP
CBL_PTK
0.25
p.L421R
ACH-000943
Colon/Colorectal Cancer
CCLE
DNLDAYSHIP
CBL_PTK
0.25
p.L421R
RKO
large_intestine
COSMIC
DNLDAYSHIP
CBL_PTK
0.25
p.V408M
SIDM00438
B-Lymphoblastic Leukemia
GDSC
DNLDAYSHIP
CBL_PTK
0.3056
p.V408M
MN-60
haematopoietic_and_lymphoid_tissue
COSMIC
DNLDAYSHIP
CBL_PTK
0.3056
Drug responses associated with PTPN23 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DNLDAYSHIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H3S7
Tyrosine-protein phosphatase non-receptor type 23
CBL_PTK
409:418
DNLDAYSHIP
CBL
0.7467
More...