DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DPDDTPPK
Uniprot ID:
O95503
Source protein:
Chromobox protein homolog 6
Source gene:
CBX6
Class:
DEG_SCF_SKP2-CKS1_1
Location:
287:294
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9586
ASA_SCORE:
95.15
COIL:
0.9534
CONS_SCORE:
0.4189
DSS_SCORE:
0.8401
HELIX:
0.0366
FCONS_SCORE:
0.9105
RIG_SCORE:
0.5661
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P302T
TCGA-A5-A0G1
UCEC
TCGA
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.1111
p.P301A
DO50383
ESAD
ICGC
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.5833
p.S303F
SIDM02018
Colorectal Carcinoma
GDSC
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.5278
p.P292L
SIDM01113
Other Sarcomas
GDSC
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P292L
ACH-000412
Colon/Colorectal Cancer
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P292L
ACH-000939
Sarcoma
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.7582
p.V300M
ACH-000678
Gastric Cancer
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.1667
p.D289N
ACH-000971
Colon/Colorectal Cancer
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.6932
p.P300S
ACH-002309
Sarcoma
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.1667
Drug responses associated with CBX6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DPDDTPPK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95503
Chromobox protein homolog 6
DEG_SCF_SKP2-CKS1_1
287:294
DPDDTPPK
SKP2,CSK1
0.9586
More...