DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DPDDTPPK
Uniprot ID:
O95503
Source protein:
Chromobox protein homolog 6
Source gene:
CBX6
Class:
DEG_SCF_SKP2-CKS1_1
Location:
287:294
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9586
ASA_SCORE:
95.15
COIL:
0.9534
CONS_SCORE:
0.4189
DSS_SCORE:
0.8401
HELIX:
0.0366
FCONS_SCORE:
0.9105
RIG_SCORE:
0.5661
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P292L
SIDM01113
Other Sarcomas
GDSC
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P292L
ACH-000412
Colon/Colorectal Cancer
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P292L
ACH-000939
Sarcoma
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.7582
p.D289N
ACH-000971
Colon/Colorectal Cancer
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.6932
p.P301A
DO50383
ESAD
ICGC
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.5833
p.S303F
SIDM02018
Colorectal Carcinoma
GDSC
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.5278
p.V300M
ACH-000678
Gastric Cancer
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.1667
p.P300S
ACH-002309
Sarcoma
CCLE
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.1667
p.P302T
TCGA-A5-A0G1
UCEC
TCGA
DPDDTPPK
DEG_SCF_SKP2-CKS1_1
0.1111
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Drug responses associated with CBX6 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DPDDTPPK
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95503
Chromobox protein homolog 6
DEG_SCF_SKP2-CKS1_1
287:294
DPDDTPPK
SKP2,CSK1
0.9586
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