DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DPEESPVPSP
Uniprot ID:
Q5VT52
Source protein:
Regulation of nuclear pre-mRNA domain-containing protein 2
Source gene:
RPRD2
Class:
DEG_COP1_1
Location:
315:324
E3 ligase:
COP1
DEGRON score:
0.8927
ASA_SCORE:
86.53
COIL:
0.921
CONS_SCORE:
0.4902
DSS_SCORE:
0.7896
HELIX:
0.0607
FCONS_SCORE:
0.8967
RIG_SCORE:
0.5569
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P322S
TCGA-DU-6407
LGG
TCGA
DPEESPVPSP
DEG_COP1_1
0.6752
p.S323F
TCGA-FR-A7U9
SKCM
TCGA
DPEESPVPSP
DEG_COP1_1
0.7982
p.S323F
SIDM00007
Other Solid Cancers
GDSC
DPEESPVPSP
DEG_COP1_1
0.7982
p.S323F
ACH-001550
Skin Cancer
CCLE
DPEESPVPSP
DEG_COP1_1
0.7982
p.S323F
MCC13
skin
COSMIC
DPEESPVPSP
DEG_COP1_1
0.7982
p.P324S
TCGA-GN-A267
SKCM
TCGA
DPEESPVPSP
DEG_COP1_1
0.6752
p.E328K
DO51612
CESC
ICGC
DPEESPVPSP
DEG_COP1_1
0.2222
p.E328K
SW954
vulva
COSMIC
DPEESPVPSP
DEG_COP1_1
0.2222
p.E334K
DO222441
ESCA
ICGC
DPEESPVPSP
DEG_COP1_1
0.0556
p.Q313H
DO228948
LICA
ICGC
DPEESPVPSP
DEG_COP1_1
0.2778
p.E309D
DO229022
LICA
ICGC
DPEESPVPSP
DEG_COP1_1
0.1667
p.G317S
DO229043
LICA
ICGC
DPEESPVPSP
DEG_COP1_1
0.6993
p.S322L
DO228414
MALY
ICGC
DPEESPVPSP
DEG_COP1_1
0.7667
p.P305S
DO222420
MELA
ICGC
DPEESPVPSP
DEG_COP1_1
0.1667
p.P311L
DO37782
SKCM
ICGC
DPEESPVPSP
DEG_COP1_1
0.2222
p.P329L
SIDM00140
Melanoma
GDSC
DPEESPVPSP
DEG_COP1_1
0.1944
p.P329L
ACH-000968
Skin Cancer
CCLE
DPEESPVPSP
DEG_COP1_1
0.1944
p.P329L
COLO-792
skin
COSMIC
DPEESPVPSP
DEG_COP1_1
0.1944
Drug responses associated with RPRD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DPEESPVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_COP1_1
315:324
DPEESPVPSP
COP1
0.8927
More...