DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DPIAEVEPT
Uniprot ID:
Q8TEU7
Source protein:
Rap guanine nucleotide exchange factor 6
Source gene:
RAPGEF6
Class:
DEG_SIAH_1
Location:
1398:1406
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9896
ASA_SCORE:
61.4333
COIL:
0.6808
CONS_SCORE:
0.3453
DSS_SCORE:
0.4872
HELIX:
0.0711
FCONS_SCORE:
1.1012
RIG_SCORE:
0.7199
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1400S
TCGA-94-A5I6
LUSC
TCGA
DPIAEVEPT
DEG_SIAH_1
0.7427
p.R1400S
DO219176
LUSC
ICGC
DPIAEVEPT
DEG_SIAH_1
0.7427
p.D1394V
TCGA-S9-A6WL
LGG
TCGA
DPIAEVEPT
DEG_SIAH_1
0.2222
p.D1394V
DO48616
LGG
ICGC
DPIAEVEPT
DEG_SIAH_1
0.2222
p.H1403N
DO228948
LICA
ICGC
DPIAEVEPT
DEG_SIAH_1
0.7423
p.S1398F
SIDM01617
Endometrial Carcinoma
GDSC
DPIAEVEPT
DEG_SIAH_1
0.7982
p.S1398F
ACH-000994
Endometrial/Uterine Cancer
CCLE
DPIAEVEPT
DEG_SIAH_1
0.7982
Drug responses associated with RAPGEF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DPIAEVEPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEU7
Rap guanine nucleotide exchange factor 6
DEG_SIAH_1
1398:1406
DPIAEVEPT
SIAH1,SIAH2,SIAH3
0.9896
More...