DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DPTAVVDPQ
Uniprot ID:
Q8NE62
Source protein:
Choline dehydrogenase, mitochondrial
Source gene:
CHDH
Class:
DEG_SIAH_1
Location:
523:531
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.6456
ASA_SCORE:
45.6667
COIL:
0.6963
CONS_SCORE:
0.6174
DSS_SCORE:
0.4734
HELIX:
0.1642
FCONS_SCORE:
0.8829
RIG_SCORE:
0.7572
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M518T
TCGA-AX-A0J0
UCEC
TCGA
DPTAVVDPQ
DEG_SIAH_1
0.1944
p.M518T
DO41133
UCEC
ICGC
DPTAVVDPQ
DEG_SIAH_1
0.1944
p.E538K
TCGA-GN-A266
SKCM
TCGA
DPTAVVDPQ
DEG_SIAH_1
0.1389
p.E538K
DO37432
SKCM
ICGC
DPTAVVDPQ
DEG_SIAH_1
0.1389
p.V528A
DO233179
GACA
ICGC
DPTAVVDPQ
DEG_SIAH_1
0.6936
p.P524H
DO229037
LICA
ICGC
DPTAVVDPQ
DEG_SIAH_1
0.7694
p.V537L
DO221123
MALY
ICGC
DPTAVVDPQ
DEG_SIAH_1
0.1667
p.P521S
DO229494
SKCA
ICGC
DPTAVVDPQ
DEG_SIAH_1
0.2778
Drug responses associated with CHDH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DPTAVVDPQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NE62
Choline dehydrogenase, mitochondrial
DEG_SIAH_1
523:531
DPTAVVDPQ
SIAH1,SIAH2,SIAH3
0.6456
More...