DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DQDFTPEK
Uniprot ID:
Q7Z4V5
Source protein:
Hepatoma-derived growth factor-related protein 2
Source gene:
HDGFL2
Class:
DEG_SCF_SKP2-CKS1_1
Location:
201:208
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9975
ASA_SCORE:
100.9125
COIL:
0.6739
CONS_SCORE:
0.4686
DSS_SCORE:
0.7284
HELIX:
0.3144
FCONS_SCORE:
1.132
RIG_SCORE:
0.6494
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P215S
SIDM00420
Bladder Carcinoma
GDSC
DQDFTPEK
DEG_SCF_SKP2-CKS1_1
0.1389
p.R216Q
SIDM00596
Endometrial Carcinoma
GDSC
DQDFTPEK
DEG_SCF_SKP2-CKS1_1
0.1111
p.R216Q
HEC-1
endometrium
COSMIC
DQDFTPEK
DEG_SCF_SKP2-CKS1_1
0.1111
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Drug responses associated with HDGFL2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DQDFTPEK
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z4V5
Hepatoma-derived growth factor-related protein 2
DEG_SCF_SKP2-CKS1_1
201:208
DQDFTPEK
SKP2,CSK1
0.9975
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