DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DQSVTEVPDV
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_COP1_1
Location:
2789:2798
E3 ligase:
COP1
DEGRON score:
0.6898
ASA_SCORE:
92.88
COIL:
0.7293
CONS_SCORE:
0.4229
DSS_SCORE:
0.4608
HELIX:
0.0233
FCONS_SCORE:
0.944
RIG_SCORE:
0.7823
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2787F
TCGA-17-Z045
LUAD
TCGA
DQSVTEVPDV
DEG_COP1_1
0.2778
p.E2794Q
TCGA-44-2656
LUAD
TCGA
DQSVTEVPDV
DEG_COP1_1
0.5633
p.E2794Q
DO26052
LUAD
ICGC
DQSVTEVPDV
DEG_COP1_1
0.5633
p.E2800D
TCGA-66-2767
LUSC
TCGA
DQSVTEVPDV
DEG_COP1_1
0.2778
p.E2800D
DO26713
LUSC
ICGC
DQSVTEVPDV
DEG_COP1_1
0.2778
p.D2789Y
TCGA-AX-A1CE
UCEC
TCGA
DQSVTEVPDV
DEG_COP1_1
0.7325
p.D2789Y
DO42280
UCEC
ICGC
DQSVTEVPDV
DEG_COP1_1
0.7325
p.M2788I
TCGA-BF-A1PZ
SKCM
TCGA
DQSVTEVPDV
DEG_COP1_1
0.3056
p.M2788I
DO50279
SKCM
ICGC
DQSVTEVPDV
DEG_COP1_1
0.3056
p.M2799T
TCGA-BH-A0EE
BRCA
TCGA
DQSVTEVPDV
DEG_COP1_1
0.3056
p.M2799T
DO6088
BRCA
ICGC
DQSVTEVPDV
DEG_COP1_1
0.3056
p.S2802T
TCGA-D5-6931
COAD
TCGA
DQSVTEVPDV
DEG_COP1_1
0.2222
p.S2802T
DO8384
COAD
ICGC
DQSVTEVPDV
DEG_COP1_1
0.2222
p.D2797H
TCGA-DK-A6B5
BLCA
TCGA
DQSVTEVPDV
DEG_COP1_1
0.7688
p.D2797H
DO48551
BLCA
ICGC
DQSVTEVPDV
DEG_COP1_1
0.7688
p.I2782V
TCGA-IB-7651
PAAD
TCGA
DQSVTEVPDV
DEG_COP1_1
0.1389
p.I2782V
DO46657
PAAD
ICGC
DQSVTEVPDV
DEG_COP1_1
0.1389
p.N2803S
TCGA-S8-A6BW
ESCA
TCGA
DQSVTEVPDV
DEG_COP1_1
0.1944
p.H2786L
DO52492
COCA
ICGC
DQSVTEVPDV
DEG_COP1_1
0.25
p.H2786Q
DO224563
LUSC
ICGC
DQSVTEVPDV
DEG_COP1_1
0.25
p.M2799I
DO222843
MELA
ICGC
DQSVTEVPDV
DEG_COP1_1
0.3056
p.S2802F
DO219878
SKCA
ICGC
DQSVTEVPDV
DEG_COP1_1
0.2222
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DQSVTEVPDV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_COP1_1
2789:2798
DQSVTEVPDV
COP1
0.6898
More...