DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DRKELSLVD
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_APCC_DBOX_1
Location:
3619:3627
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8668
ASA_SCORE:
85.4667
COIL:
0.4764
CONS_SCORE:
0.5852
DSS_SCORE:
0.3775
HELIX:
0.5054
FCONS_SCORE:
1.2368
RIG_SCORE:
0.7827
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R3630H
TCGA-AA-3967
COAD
TCGA
DRKELSLVD
DEG_APCC_DBOX_1
0.25
p.R3627G
TCGA-CR-7388
HNSC
TCGA
DRKELSLVD
DEG_APCC_DBOX_1
0.7568
p.R3630C
TCGA-EB-A550
SKCM
TCGA
DRKELSLVD
DEG_APCC_DBOX_1
0.25
p.R3630C
ACH-000750
Skin Cancer
CCLE
DRKELSLVD
DEG_APCC_DBOX_1
0.25
p.R3630C
ACH-000971
Colon/Colorectal Cancer
CCLE
DRKELSLVD
DEG_APCC_DBOX_1
0.25
p.D3610N
DO2943
BRCA
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.0833
p.R3627I
DO229022
LICA
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.8102
p.S3621I
DO229031
LICA
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.7341
p.D3610Y
DO229008
LICA
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.0833
p.V3617M
DO48587
LIHC
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.2778
p.R3635Q
DO23356
LINC
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.1111
p.R3635W
DO43306
UCEC
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.1111
p.R3635L
DO41847
UCEC
ICGC
DRKELSLVD
DEG_APCC_DBOX_1
0.1111
p.I3635L
SIDM00962
Chronic Myelogenous Leukemia
GDSC
DRKELSLVD
DEG_APCC_DBOX_1
0.1111
p.I3635L
BV-173
haematopoietic_and_lymphoid_tissue
COSMIC
DRKELSLVD
DEG_APCC_DBOX_1
0.1111
p.R3631C
SIDM00149
Melanoma
GDSC
DRKELSLVD
DEG_APCC_DBOX_1
0.2222
p.R3631C
SIDM00783
Colorectal Carcinoma
GDSC
DRKELSLVD
DEG_APCC_DBOX_1
0.2222
p.R3631C
HCT-116
large_intestine
COSMIC
DRKELSLVD
DEG_APCC_DBOX_1
0.2222
p.R3631C
LOXIMVI
skin
COSMIC
DRKELSLVD
DEG_APCC_DBOX_1
0.2222
p.I3634L
ACH-000432
Leukemia
CCLE
DRKELSLVD
DEG_APCC_DBOX_1
0.25
p.Q3611L
ACH-001396
Metastasis
CCLE
DRKELSLVD
DEG_APCC_DBOX_1
0.1111
p.F3637L
SNU-81
large_intestine
COSMIC
DRKELSLVD
DEG_APCC_DBOX_1
0.0556
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DRKELSLVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU4
Alstrom syndrome protein 1
DEG_APCC_DBOX_1
3619:3627
DRKELSLVD
APC,CDC20,FZR1
0.8668
More...